| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2281 |
|---|
| Symbol | |
|---|
| ID | 5054691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 2042459 |
|---|
| End bp | 2044087 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640469833 |
|---|
| Product | NADH/ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_001154477 |
|---|
| Protein GI | 145592475 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.454821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.480352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTTG AGCTCTGGTT GCTGGTCCTC GCCCTACTCG CCTTAGCCGA TCTCTTCACC
AAGAAGGGCA TAGGCTCGCT GGTAGGCGGC GCCGCTACCC TCTACCTATC CCTCACAAGG
TCGCTGATGC CGGCGACGCA CCTCTTCCAC ATGGGGGATC TCGCCCACCC ACTATATATC
TTCATATCTG GGATATATAC CGCCATCGCG GCGTACTCCA TCTGGTACGC CAGCCACTTG
GAGAGGAGGG GGTGGTTCTG GCTGTGGATG GGGGTGTTCT ACACCTCCAT GCTCACCTTC
GTCGCCGCCG ACCACTGGCT TGTTTTGATA ACGGGGTGGG GGGGTCTCGA CATAGCTAGC
TGGGCCCTAA TCCTCACCTA TCACGACGGT GAGAAGTACG GCCGCGTGGG GCCGGGGGGG
AGGGCATGGG GGGTGGCATG GGAGTGGGCG CCAAGCGCCT CGGCGCTGAG GGCTATCTTG
ACCGTGGAGA TAGGCACCGC CTCTCTCGCC GCGGGCCTTG CCCCGGCCGC CGCCGCGCAG
GGCCCGCACA TAAGCTCGCT GTCCGCCATG TCTGACCTCT CAGCGGCGCT TGTTCTGACG
GCGGCTTTCG TGAAGGCGGC CCAGCTACCC TTCACAGACT GGCTTATGAC CGCGATGTCG
GCACCTACGC CAGTCAGCGC CCTGCTCCAC AGCTCGACGA TGGTGAAGGC AGGGCCGATA
CTCCTCCTCA AGCTGGGACA CGCCATGCCC ACATGGGCTG CGGGGACGGC CTTCGCCTTC
GGCATCGCCA CTGCCTTGTA CGGAGGCGTC GTGGCGCTTG GGCAGAGAGA GCCGAAGGTC
CTCCTCGCCG CCTCCACTGC CTCATATCTA GGCCTCATAA CAGCCTTCGC CCTTGCGAAG
CCGGAGGAGG CGCTGTGGCT CACCTACTCC CATGGAGTGG CCAAGGCAAC TCTCTTCATG
GCGGTTGGCC ACGCCATACA TATAGAGCAC ACAACCACGC CCACCCGGTT CCCCGTGGCG
GCCAAGGCGG CTATGGGCCT TGCCCTCCTG ACGCTGGTGG GGCTGACCCC CCTAGGTGCA
GTCGCCAAGA GCAACGCCGA GCCTTGGTTC CTTCTGTTCT CCTTCCTGAC CGCGGGGTAC
GTGGGGAAGT TGATGCTAAA GACAGCCACC ACGCCGGGCG GCTGGGCGGT GGCGGCGCCG
TATACAGCGC TGGCGGCGGC CAGCTTGGCT TTCCCCGTCT TGCCTAACCC CTTCTGGGCC
CTCGCGCTTG CCGGCCTGGC ATTGGCGAAG ACGCCTGAGC CCACCGTTTT GCTCAGGCGG
CTGGGTCTAC CCGTTCTCTA TGACGCGGTG GCCCCCGCCG TGTTTAAGGC AGTGAGGCAG
GCCGCGGCGG TGGGAGACGG CTTTGTGGAC AAGCGCCTCT TATCACTGGA GGGGCTGTGG
CGGGGCTTGG CGTCCCTCGT CGCCGTCGTG GACTTAATCT TCGACATGTT GCTCCACGAC
TTCGTTCCCG CCCTAGTGCA GTCCGCCTCT GCCCAGCTAT CTAGGCGGAG TTTCGACTAC
TACCTATACG TGGCCGGCGT CGGCGCGGGG ATAATCTTGG CCCTCGCGGT GTTGCTATGG
ATCCACTAA
|
|---|
| Protein sequence | MMLELWLLVL ALLALADLFT KKGIGSLVGG AATLYLSLTR SLMPATHLFH MGDLAHPLYI
FISGIYTAIA AYSIWYASHL ERRGWFWLWM GVFYTSMLTF VAADHWLVLI TGWGGLDIAS
WALILTYHDG EKYGRVGPGG RAWGVAWEWA PSASALRAIL TVEIGTASLA AGLAPAAAAQ
GPHISSLSAM SDLSAALVLT AAFVKAAQLP FTDWLMTAMS APTPVSALLH SSTMVKAGPI
LLLKLGHAMP TWAAGTAFAF GIATALYGGV VALGQREPKV LLAASTASYL GLITAFALAK
PEEALWLTYS HGVAKATLFM AVGHAIHIEH TTTPTRFPVA AKAAMGLALL TLVGLTPLGA
VAKSNAEPWF LLFSFLTAGY VGKLMLKTAT TPGGWAVAAP YTALAAASLA FPVLPNPFWA
LALAGLALAK TPEPTVLLRR LGLPVLYDAV APAVFKAVRQ AAAVGDGFVD KRLLSLEGLW
RGLASLVAVV DLIFDMLLHD FVPALVQSAS AQLSRRSFDY YLYVAGVGAG IILALAVLLW
IH
|
|---|
| |