| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2275 |
|---|
| Symbol | |
|---|
| ID | 5056203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 2036576 |
|---|
| End bp | 2037547 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640469827 |
|---|
| Product | respiratory-chain NADH dehydrogenase, subunit 1 |
|---|
| Protein accession | YP_001154471 |
|---|
| Protein GI | 145592469 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0754968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.291328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTCC TCTCGCCCGA GCTGTTGGCC GCCGTGGTCT TCCCAGGGGT GCTGGCCATG
CTCGGCTTTT TGGTTGTGGC TATATGGGCT GAGAGGAAGC TTGTGGCGAG GATTCAGTGG
CGCTATGGCC CCCTCTACGT CTCAAAGCCC ATTGGCGGTT TCCTCCAGCC GATTGCCGAC
TTGGTGAAGC TGGTGTTCTC CGAGCTGGTG TTGCCGAGGC ACACTAACCG TTTCCTCTTC
GCCGCGACTC CGGTAATACT GTTTATCGCC GAGGCTCTGC CCGCGGCGTT TATAGCCGCG
GCGCCGGGCC TCGTGATTCT TTACAACCCA TACGGCGTGG TGATCGCCGC CGTCGTTATG
CTCCTCGTTG CTGTGTTTCT GGTGGCCATG GCCTGGACGG AGGCGGATAG GTGGACCTAC
ATCGGCGCGG TGAGGGAGAT ATTATTGACC GCCGCCTACG AGGTGCCCCT CCTCTTGTCC
ATTCTTGCCA TGGTTGTGCT TTACGGCACC GCCGACCCCT TCGGCGTTGT GGAGAAGCAG
TGGGTATGGG GGGTACTGCT CAACCCCCTG GCCTTTGTGG CGTTTTACAT CTCCCTCATG
ATGTCCACCA CGAGGTTTCC TTTCGAAATA CCAGAGGCCG AGCCTGAGGT GGTGCTGGGG
CCCTACACGG AATACGGCTC CACCCTCTTC ATCTTGTCCT TCGGCGGTAC GTATGTCAAG
ATGTACGCGG CCTCGCTCCT GGGCGTTGCG TTGTTTCTCG GCGGCTGGCT CCCCGCGGGC
GACACCGTGT CAGGGGCCGC CGTCACCGCC GCCAAGCTCG CGCTGTTTGT TCTGCCCCTC
CTCCTGGTGA GGGCGATTTA CCCCAGGTAC CGCATCGACC AGGCGCTGAG GCTGGGCTGG
ACTAAGCTAC TGGCTCTATC CGTTGCGGCA GTGGCCTGGT CTCTGGCGGC GAGGCTATGG
TTGGGTTTCT AG
|
|---|
| Protein sequence | MILLSPELLA AVVFPGVLAM LGFLVVAIWA ERKLVARIQW RYGPLYVSKP IGGFLQPIAD
LVKLVFSELV LPRHTNRFLF AATPVILFIA EALPAAFIAA APGLVILYNP YGVVIAAVVM
LLVAVFLVAM AWTEADRWTY IGAVREILLT AAYEVPLLLS ILAMVVLYGT ADPFGVVEKQ
WVWGVLLNPL AFVAFYISLM MSTTRFPFEI PEAEPEVVLG PYTEYGSTLF ILSFGGTYVK
MYAASLLGVA LFLGGWLPAG DTVSGAAVTA AKLALFVLPL LLVRAIYPRY RIDQALRLGW
TKLLALSVAA VAWSLAARLW LGF
|
|---|
| |