Gene Pars_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2257 
Symbol 
ID5054250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2022608 
End bp2023150 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID640469810 
Producthypothetical protein 
Protein accessionYP_001154455 
Protein GI145592453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.122322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0336934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTGT TAATTTTCCA CGGCTCCCGG GACCCCGACC ACAACTTGCA GGCGGCCGAG 
CTGGCGAGGG CACTCGGACT AGGGTACGCC TTCATGGAGA CGGAACCTAG GTTCAGTGGC
GGCGTCGGCG TGCCTATGTT CGTGGCAGAC GGCGCAGATT ACAGACACGC AGCAGAGGTA
GCCACGGTGA AGGCCCCCCC TCTTCTGCGC TGGCCCGGCT TCGCCGACTA TTTAAAAGGC
CTCGGCGCCC AGCTCTACAT TTTCCACGGC CCAGACCGCG GCGACGTGGC GGCGCTGGGG
CTCCCAGTGG CGTTCCTAGA AGGGGAACCT AGCATTGAAG ACGCCCCCTG TGTAGAAATG
GCGGCTCCTG TTGTCCTCAC CCGAGGCTAT ATTTACAAAA AAATAGCGGC TAAGTACAGC
AGATGCCAAG CCAACCTCCT CCCCCCCTTA GCCGAGCAAC CAACCTTTAT TGAGTACCTA
AGAAGGACTC TGCCCATAAT AATAAGCAGG TACAGGCAAG CCGATATCGC AACAAACTAC
TAG
 
Protein sequence
MIVLIFHGSR DPDHNLQAAE LARALGLGYA FMETEPRFSG GVGVPMFVAD GADYRHAAEV 
ATVKAPPLLR WPGFADYLKG LGAQLYIFHG PDRGDVAALG LPVAFLEGEP SIEDAPCVEM
AAPVVLTRGY IYKKIAAKYS RCQANLLPPL AEQPTFIEYL RRTLPIIISR YRQADIATNY