| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2236 |
|---|
| Symbol | |
|---|
| ID | 5055833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 2003681 |
|---|
| End bp | 2005033 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640469789 |
|---|
| Product | TIP49-like protein |
|---|
| Protein accession | YP_001154434 |
|---|
| Protein GI | 145592432 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1224] DNA helicase TIP49, TBP-interacting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.385068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTA TTAAAATTGA AGAGGTAAAC ACCTCCCTGG AGAGGTTTGC GGCCCACAGC
CACATTAAGG GGCTGGGAGT TAGAGATGGG AAAGTCCAAT TTGTGGCTGA CGGCTTTGTG
GGGCAGACCG AGGCGCGGGA GGCCGCTTAC ATAATTGTCC AGATGATTAA GGAGGGAAAG
TTCGCAGGGA GGGGTGTACT TATCGTCGGC CCCCCGGGCA CGGGGAAGAC GGCGCTGGCT
TTGGGAATAG CCCGGGAGCT GGGCCCGGAG ACGCCCTTTG TGGCGATCTC CGGCGGCGAG
ATATACTCGC TTGAGGTGAA GAAGTCGGAG TTTTTGATGA GGGCTCTGAG GAGGGCCATA
GGGATTAGGA TTAGGGAGTG GAGGAAGGTA TATGAGGGAG AGCTGAGGTC TATTGATATT
AGATATGGGC GCCACCCCTA CAACCCATAC CTGCAGAGGG TGTTGGGGGC CACCATCAAG
CTGAGGACTC GGGACGAGGA GAAGACGCTG AGGGTGCCGG CTGAGATTGC GCAACAGCTA
ATTGAGCTCG GCGTGGAGGA GGGGGACGTG ATTATGATAG ACGAGGAGAC AGGCGCTGTG
TCGCTGGTGG GCAGAGGCGA GGGCGGCGAG CAATACGACG TGGGTAGGAG GAGGATCGAG
CTCCCCAAGG GGCCCGTCTA CAAGGAGAAG GAGATAGTCA GGTTCTACAC GCTTCACGAT
GTGGACATGT CCCTGGCCAG GCAGAGGGGG CTGATCTCGG CCATGCTGTT CGGCTTTGCC
GAGGAGGTAA AGGAGATCCC AGAAGAGATT AGGAGGCAGA GCGACGAAAT AGTCAAGAAA
GTACTAGAGG AAGGCAAGGC GGAGCTGGTG CCAGGAGTGT TGTTCATCGA CGACGTCCAC
CTCCTCGATA TAGAGAGCTT CTCATTCTTA ATGAGGGCTA TGGAGACGGA GTTTGCCCCC
ATCATAATTA TGGCCACCAA TAGGGGGATT GCAAGGATTA GGGGTACTGA CATAGAGGCG
CCGCACGGAA TCCCCCAGGA CATGCTGGAT AGACTCGTCA TTATTCGTAC TCGGCCCTAT
ACGGCTGAGG AGATACGCGA GATTATCTCC ATAAAGGCGA ATGAGCAGAA GGTACCGCTG
ACCAAAGAGG CCCTTGATCT CCTCACATCA ATAGGCGTAG ACCACTCGCT GAGGTACGCC
CTCCAGTTGT TGACGCCGGC TTATATAGTC GCAAAAGAAC GCGGCAAGGG GTCTGTGGGC
AGAGAGGAGA TAGAAGAGGT GAGGAGGCAT TTCGTTTCGG TGAAGGAGTC CGTGGAGTAC
GTGAAGTCGC TGGAGGAGAA GTTTTTAAGA TAG
|
|---|
| Protein sequence | MSSIKIEEVN TSLERFAAHS HIKGLGVRDG KVQFVADGFV GQTEAREAAY IIVQMIKEGK
FAGRGVLIVG PPGTGKTALA LGIARELGPE TPFVAISGGE IYSLEVKKSE FLMRALRRAI
GIRIREWRKV YEGELRSIDI RYGRHPYNPY LQRVLGATIK LRTRDEEKTL RVPAEIAQQL
IELGVEEGDV IMIDEETGAV SLVGRGEGGE QYDVGRRRIE LPKGPVYKEK EIVRFYTLHD
VDMSLARQRG LISAMLFGFA EEVKEIPEEI RRQSDEIVKK VLEEGKAELV PGVLFIDDVH
LLDIESFSFL MRAMETEFAP IIIMATNRGI ARIRGTDIEA PHGIPQDMLD RLVIIRTRPY
TAEEIREIIS IKANEQKVPL TKEALDLLTS IGVDHSLRYA LQLLTPAYIV AKERGKGSVG
REEIEEVRRH FVSVKESVEY VKSLEEKFLR
|
|---|
| |