Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2109 |
Symbol | |
ID | 5055083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1884762 |
End bp | 1885568 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640469661 |
Product | transketolase domain-containing protein |
Protein accession | YP_001154307 |
Protein GI | 145592305 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3959] Transketolase, N-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.337076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAGAG GGGGGGTTTC GGAGCTAGAC CAACTGGTTT GCAAGGCTAG GAGGTACGTG GTGTTGATGG CCGGCTACGA TCCAGGTATT CACCTGGGCT CTTCGTTGTC TGTAATGGAG ATAGTGGCGG CGCTATACGG CACCGGCAGG GTTAAATTCA ACGTGGGAAA CGGGGCCCAC AATAGGAATT ACTTCGTCCT TTCAAAGGGG CATGCGATCC ACGCCGTGTA TGCGCTCGCG GCAGCCATGG GATACCTAAC ACTCGACGAG CTGAGGGAGA CCGGCAGCTT GGGTAGCAGG CTTCAGAACC ACCCCGAGGT TGACACCCCC TTCGTGGATG TGCCTAATTC CGGCTCGCTG GGCCAGGGAA TAAGCCTCGC CGTCGGCCTT GCCCTGGGGT TGAGGTTGAA GGGGGAGAGA GGCCGGGTCT ACCTTGTTGT CGGCGACGGG GAGCTGGACG AGGGGCAGAG CTGGGAGTCC TTCGCCGTGG CGGCGCACTA CAATCTCGCA AACCTAGTCA CTATTGTAGA TCTAAACGGC GTGCAACTAG ACGGCCACAG CGAGGAGGTT TTGAGGAAGG GCGACCTCGC CGGGAGGTTT AAATCCCTCG GTTTCGAGGT GTTCGAGGTC GATGGGCATG ATGTTGGCCA GCTGATATCT GCTCTGGAGA GGGCTGAGAA GAGCGAGAGG CCTGCTGTGA TTATTGCCAA GACTGTGAGG GGGAAGGGGG TGCCCGCCAT AGAGGACACG GCGAAGCAGA GGCTTTCCAG AGACGACGCG TTAAAATACG CTGGGGACAT ATGCTAG
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Protein sequence | MERGGVSELD QLVCKARRYV VLMAGYDPGI HLGSSLSVME IVAALYGTGR VKFNVGNGAH NRNYFVLSKG HAIHAVYALA AAMGYLTLDE LRETGSLGSR LQNHPEVDTP FVDVPNSGSL GQGISLAVGL ALGLRLKGER GRVYLVVGDG ELDEGQSWES FAVAAHYNLA NLVTIVDLNG VQLDGHSEEV LRKGDLAGRF KSLGFEVFEV DGHDVGQLIS ALERAEKSER PAVIIAKTVR GKGVPAIEDT AKQRLSRDDA LKYAGDIC
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