Gene Pars_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2109 
Symbol 
ID5055083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1884762 
End bp1885568 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID640469661 
Producttransketolase domain-containing protein 
Protein accessionYP_001154307 
Protein GI145592305 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.337076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGAG GGGGGGTTTC GGAGCTAGAC CAACTGGTTT GCAAGGCTAG GAGGTACGTG 
GTGTTGATGG CCGGCTACGA TCCAGGTATT CACCTGGGCT CTTCGTTGTC TGTAATGGAG
ATAGTGGCGG CGCTATACGG CACCGGCAGG GTTAAATTCA ACGTGGGAAA CGGGGCCCAC
AATAGGAATT ACTTCGTCCT TTCAAAGGGG CATGCGATCC ACGCCGTGTA TGCGCTCGCG
GCAGCCATGG GATACCTAAC ACTCGACGAG CTGAGGGAGA CCGGCAGCTT GGGTAGCAGG
CTTCAGAACC ACCCCGAGGT TGACACCCCC TTCGTGGATG TGCCTAATTC CGGCTCGCTG
GGCCAGGGAA TAAGCCTCGC CGTCGGCCTT GCCCTGGGGT TGAGGTTGAA GGGGGAGAGA
GGCCGGGTCT ACCTTGTTGT CGGCGACGGG GAGCTGGACG AGGGGCAGAG CTGGGAGTCC
TTCGCCGTGG CGGCGCACTA CAATCTCGCA AACCTAGTCA CTATTGTAGA TCTAAACGGC
GTGCAACTAG ACGGCCACAG CGAGGAGGTT TTGAGGAAGG GCGACCTCGC CGGGAGGTTT
AAATCCCTCG GTTTCGAGGT GTTCGAGGTC GATGGGCATG ATGTTGGCCA GCTGATATCT
GCTCTGGAGA GGGCTGAGAA GAGCGAGAGG CCTGCTGTGA TTATTGCCAA GACTGTGAGG
GGGAAGGGGG TGCCCGCCAT AGAGGACACG GCGAAGCAGA GGCTTTCCAG AGACGACGCG
TTAAAATACG CTGGGGACAT ATGCTAG
 
Protein sequence
MERGGVSELD QLVCKARRYV VLMAGYDPGI HLGSSLSVME IVAALYGTGR VKFNVGNGAH 
NRNYFVLSKG HAIHAVYALA AAMGYLTLDE LRETGSLGSR LQNHPEVDTP FVDVPNSGSL
GQGISLAVGL ALGLRLKGER GRVYLVVGDG ELDEGQSWES FAVAAHYNLA NLVTIVDLNG
VQLDGHSEEV LRKGDLAGRF KSLGFEVFEV DGHDVGQLIS ALERAEKSER PAVIIAKTVR
GKGVPAIEDT AKQRLSRDDA LKYAGDIC