Gene Pars_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2017 
Symbol 
ID5054481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1805189 
End bp1805884 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content59% 
IMG OID640469567 
Producthypothetical protein 
Protein accessionYP_001154216 
Protein GI145592214 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATCT ACGTTGGCAC TTCGGGGTGG CTCTACTCGT GGAACCTAGG CCGGTCTCTG 
AGGTGGTATG TGGAGAACTC CGGCCTCAAC GCAGTGGAGC TCAACGCAAG CTTCTACCGA
ATGCCCACAG CCAGGCAGGT CGAAAAGTGG CGCGCCGAGG GGTCATCCCT TAGGTGGGCT
GTGAAGGTGT ATAGGGGGGT GACACACTTC GGCCGCCTAT CGGAAAAGGC TCTGGAGTTG
CTAAAGCGCT TCCTCGCTCT TTTCGAGCCC ATGGACCACC TCGTGGATTT CTACCTCTTC
CAGCTGCCCC CATTCTTTAC CAACACAAGC AGAAACAGAG CACGTGTCGA GAGGATCGCC
TCTGCGTTGG GGCCGAGGGC GGCCTTCGAG TTCCGCCACA GTAGCTGGTT TACGGAAGAG
GTGGCGAGGT GGGCAGAGGA GGCCGGCTTC ACCCCCGTCT CTGTCGACTC GCCCGACGCG
TCGTGGGTCG TCTCCACAAG GGGGGTTGTC TACTTGCGCA TGCATGGCAG AACGGCGTGG
TATTCGCACT ACTACGAGGA GGACGAGCTT GAGGAGATAG CCGGCAGGTT GTTGTCCCTG
GCCCCGAAAA GGGTGTACGT GTTCTTCAAC AACGACCACG CCATGCTGGA AAACGCCAGG
TCTATGCTGG CTATTTTAAA AGGCTCCGGC AACTAG
 
Protein sequence
MEIYVGTSGW LYSWNLGRSL RWYVENSGLN AVELNASFYR MPTARQVEKW RAEGSSLRWA 
VKVYRGVTHF GRLSEKALEL LKRFLALFEP MDHLVDFYLF QLPPFFTNTS RNRARVERIA
SALGPRAAFE FRHSSWFTEE VARWAEEAGF TPVSVDSPDA SWVVSTRGVV YLRMHGRTAW
YSHYYEEDEL EEIAGRLLSL APKRVYVFFN NDHAMLENAR SMLAILKGSG N