Gene Pars_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1927 
Symbol 
ID5055072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1732775 
End bp1733878 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content54% 
IMG OID640469473 
ProductDNA topoisomerase VI subunit A 
Protein accessionYP_001154126 
Protein GI145592124 
COG category[L] Replication, recombination and repair 
COG ID[COG1697] DNA topoisomerase VI, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.856595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGCA GGTCTGAATT TCTGGAGAGG CTGGAGAAGT GGGGCTACAA CTTGACGAAG 
GCTGTGCTGG AGCTGGAGGA GCCCGTAATG GAAATCCCAG CACGCACTCT AAGTAATACG
ATCTGGGATG AGAAGGCGAA GATGCTTAAG CTCGGCCCCG AGAAGATGCA CAGGAGGTTC
CTCGACATGA AAGAGGCACG GCGGTTTATG CAGACGGTCC TCATGCTCCG CCTGATAGTA
GAGGCGATTA GGGAGGACGT GTACCCCACG ATAAGAGATC TGTACTACAA CGGGAAGCAC
ACCATAGTCT TTAAGGATCC CCTGGGTAGG GCGCACCGGG AGAACACCTG GGACGAGCAG
GACGAGTCCA ACGCGGTGAT TGAGGACATA GAAGTGGCTA CTAATGTGCT TAGGGAGGAG
ATGGGAGTGT CTGCCGACGT TAAGGGTAAG ATCGTGGGGC CTATTGTCGT GAGGTCCCAG
GGCTACGAGC TAGACGCGAG CAAGTTCGGC GAAACTGCGC TTAGCCTTCC TGTGAACGTA
GACGCTTTGG AGATAGTGAA GGTGGAGGCG GCCTACGTCC TCGTGGTTGA GAAAGACGCA
ATTTTCCAGC GCCTCGTACG CGAGAAGTTC TGGAGCCAGG AAAACGCCAT TCTCGTCACG
GCAAAGGGCA TGCCAGATAG GGCAACGAGG CGTTTTATAA GGAGGCTTAA CGAGGAATAC
AAACTGCCCG TGTACGTCCT CACCGACGGC GACCCCTACG GATGGTATAT ATACAGCGTC
TACAAAAGCG GCTCTATTAA GCTGAGCTAC GAGTCGGAGC GGCTGGCGAC GCCCGAGGCC
AAGTTCCTGG GGCTGACCGC GACAGATATC GACGCGTACA AGATCTCAGA CAACTACGTA
ATAGCCGCGA CGGACCGCGA CGTCAAGAGG GCACAAGAGC TCCTCCGCTA CCCCTGGTTC
CAGAAGTCTG AGTGGACCAA AGAAATTAAC CTATTCCTCA AGAAGAAGAA AAAGGTTGAA
ATAGAGGCGC TGTCTACACA CGGTCTGAAA TTCCTACACG ACTACCTCCG CGATAAAATT
AGAAACAAGA AGTTCATCGA CTAG
 
Protein sequence
MSSRSEFLER LEKWGYNLTK AVLELEEPVM EIPARTLSNT IWDEKAKMLK LGPEKMHRRF 
LDMKEARRFM QTVLMLRLIV EAIREDVYPT IRDLYYNGKH TIVFKDPLGR AHRENTWDEQ
DESNAVIEDI EVATNVLREE MGVSADVKGK IVGPIVVRSQ GYELDASKFG ETALSLPVNV
DALEIVKVEA AYVLVVEKDA IFQRLVREKF WSQENAILVT AKGMPDRATR RFIRRLNEEY
KLPVYVLTDG DPYGWYIYSV YKSGSIKLSY ESERLATPEA KFLGLTATDI DAYKISDNYV
IAATDRDVKR AQELLRYPWF QKSEWTKEIN LFLKKKKKVE IEALSTHGLK FLHDYLRDKI
RNKKFID