Gene Pars_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1853 
Symbol 
ID5056059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1657629 
End bp1658135 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content49% 
IMG OID640469399 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001154056 
Protein GI145592054 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.199579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.332251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGA TAGATCGTAA ACTTATTATG GCACTCCAAG AAGATGGTAA AAAGACTTTA 
CAGGAACTAA GCGAGCTAGT TGGCAGACCA AAGACCACTA TAGCGACGAG GATAAAAAAA
CTAGAAATCG ACGGTGTTAT CATCGGTTAC AAGGCCGTGG TAAACCCCTT TGCTCTCGGC
TATAGGCTAC TATCTTTTGT CCTCGTCAGC GTTAGAAGGG GCACTGCCCC CCGGGAATCT
AAGCCGCTTC AGGTCGAAGT AGCGGAGAAG GTTCTTACAG AGTGTAAAGG GGAGGGGGGC
CTGCCGTATG TTGAAGAGGC ATATGTAGTT ACGGGCCCAT ATGATCTTCT TTTCAAGGTG
TGGTCAAGGG ATGTTAAACA ACTGTCGAAC TTTCTCGTGG CGTATCTCGC GTCCGACCCG
AATATCCAAA GGACCGAAAC CATGATTGTA TTGGAAATAG TAGACGACTG GCGTAGACGC
GTGATGCCGC CCGCCACGCC GGGGTAA
 
Protein sequence
MDEIDRKLIM ALQEDGKKTL QELSELVGRP KTTIATRIKK LEIDGVIIGY KAVVNPFALG 
YRLLSFVLVS VRRGTAPRES KPLQVEVAEK VLTECKGEGG LPYVEEAYVV TGPYDLLFKV
WSRDVKQLSN FLVAYLASDP NIQRTETMIV LEIVDDWRRR VMPPATPG