| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1851 |
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| Symbol | |
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| ID | 5056073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1656128 |
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| End bp | 1656682 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640469397 |
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| Product | putative RNA-processing protein |
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| Protein accession | YP_001154054 |
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| Protein GI | 145592052 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
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| TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.916609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.125825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTTAT ATCCTTATGC CAATTACCCC GTGGCTTCGG AATACATGAG AGGCACATTG
TTCCAGCCTA TAGACCCAAA AAGGCTGAGG GCAGCTAGGG AATTTGTAAA AATGGCAGAC
GGGCGGTACG GGATAAGGGT GGAATTAGAT GAGAAGGAAC TATACATCAA GCTCACTCCA
GGACCGGACG CCGCCGTAGA CGCTATCTTG AAGGTCAGAG AGATGGCCAA GGCCGTGGCT
CTTGGCTTCG CACCTGACCA GGCCATGGCA TTGGAGAGCG ATGAGTACGT GTTAACTGTG
ATAGATCTCA AGGAAGTTAC TGATAAACCC AACCACCTAA GGCGTATAAA AGGGAGGATA
ATAGGAGAAG ATGGGAGGGC CAAAAAAACC ATTGAAAACC TAGCCCAGGT GGCTATGGTC
ATCGGCGACA CCTACGTGGC TATTCTAGGT AAGTTAGAGG ATGTAGAGAT AGCTAGGAGG
GCAGTGGAGA TGTTGATAGA AGGGAAGAAA CATGGTACTG TGTACAAGTT TATACAAAGC
CTAAAGAGAC CTTAA
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| Protein sequence | MVLYPYANYP VASEYMRGTL FQPIDPKRLR AAREFVKMAD GRYGIRVELD EKELYIKLTP
GPDAAVDAIL KVREMAKAVA LGFAPDQAMA LESDEYVLTV IDLKEVTDKP NHLRRIKGRI
IGEDGRAKKT IENLAQVAMV IGDTYVAILG KLEDVEIARR AVEMLIEGKK HGTVYKFIQS
LKRP
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