| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1848 |
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| Symbol | |
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| ID | 5055317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1652989 |
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| End bp | 1654803 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640469394 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001154051 |
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| Protein GI | 145592049 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.154193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TTATATTCTA TATACATCTA AATACTGTGA AAATCCTCCT TCTAGGCAAC
GAGGCAATTG CTTACGGTGC GCTGGCTGGA GAAGTAGCCG TTGCGACGGC GTATCCCGGT
ACTCCCTCAA CAGAAATATT AGAAACGCTG GAGGAATTTA GGGACAGGTT TGTTCACTGG
GCTACCAATG AGAAAACAGC CTTGGAGATA GCATATGGTG CTGCGGTGGC TGGCGCAAGG
GCGCTTGTAG CAATGAAACA CGTGGGGCTA AACGTAGCCG CAGACCCGCT CCACAGCGCC
GCCTATACCG GTGTTGAGGG CGGCTTAGTT GTGGTATCCG CTGACGACCC ATGGATGCAT
TCATCTCAAA ACGAACAAGA CACGAGGTGG TACGGCCTCC AGGCATACGT GCCTGTCTTA
GAGCCTTCCG ATCCCGCCGA GGCGTATAGA TATGCTAAGA CCGCCTTTGA ACTAAGTGAG
AAGTTGAAAC ACCCTATAAT TCTGAGGAGT GTCACCCGGG TGAGCCACGT AAGAGCCCCA
GTGGAGGTGG AGCCTCCTTC TCCTCCCAAG TGGGGTCGCT TCTCGAAAGA TATCAGTAGA
TTTAACTTAG TGCCTGCATA TGCAAGAGAG AGAAGAAAGG CCCTCGTTGA GAAGTGGGGA
ACTATAGGCG AAGTCAGCGC AGAGCTTATG CGTGTAGAGC CAGGCGGCCA TGTGACTATT
GTAACGTCGG GCGTTGCATA TAACTACGTC AAGGAGGCCG TAAGGCTACT GAATATCGAT
GCTACAATAA TAAAGCTGGG GATGCCAGTG CCAATACCGC CTAAAATAAG AGAACTAGTT
AAAGGCACAG TTGTAGTGGT AGAAGAAGGC GACCCAATTG TCGAGACCCA GTTAAGAGCC
CTTCGCCTAG AGACAAAGGG CAAAATTGAC GGCTATTTCC CAAAATACGG CGAGCTCAAT
ACTAGGAAAG TGGCGGAAGG TATCGCCAAG GCGTTAGATA TTCCCTACAA TCCGCCCCAG
CCGCCAAAGT CCCCGATTGA GGCGCCGCCG AGGCCGCCGG TGTTATGCCC AGGTTGTCCT
CACATGGGCA CGTTCTACAT ACTCAGGCTG GCGACGGCTG GGCTAAACCC AGTGTGGTCG
GGAGATATAG GATGCTACTC CCTAGGTATA AACACAGGAC AGCAAGACTT AATCACGCAC
ATGGGATCTT CAGTAGGGCT TGGGATGGGC GTCGCCGTAG CGTCGAAACA GTTCGTTGTC
GCTACGGTGG GCGACTCAAC TTTCTACCAC GCAGTTCTCC CCCAGCTGAT AGACCTAGCC
ACAAAGAAGG TACCCCTCCT TGTCGTCGTA ATGGACAACG CCTACACGGC CATGACAGGA
GGCCAGCCCA GCCCCAGTAG GCTAATACCG CCTGAGAAAA TCGCGGAGAC GTTTGGAATA
CCCGCCTTTG TCATAGATCC TGCTGATATC AAAACCTCTA TAGAAGTGAC CAAGAGAGCT
GTTGAAATTG TTAAAAGCGG GAGGCCGGTC CTCGTAGTCT CAAAGAGGCC TTGTGTGCTT
GTTGCGACGA GAAAGGCCAG GAAGGCGGGT GTGGCAATTC CGAAGTACAA GGTTGAGCCG
GAGAAGTGCA TAGGATGCGG GATATGTTAT AATCTCTTGA AGTGTAGCGC CATCCAGGCT
AGGCCTGATC GCAAGGCATA TATCGATCCT GCCCTGTGTG TTGGGTGCGG TATGTGCGCC
GAGGTGTGTC CTGTCGACGC CATCAAGGGT GACGGTGCAC GAGTGAAATG GCTAGAGGTA
TGGCAACAAG CCTAG
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| Protein sequence | MKNLIFYIHL NTVKILLLGN EAIAYGALAG EVAVATAYPG TPSTEILETL EEFRDRFVHW
ATNEKTALEI AYGAAVAGAR ALVAMKHVGL NVAADPLHSA AYTGVEGGLV VVSADDPWMH
SSQNEQDTRW YGLQAYVPVL EPSDPAEAYR YAKTAFELSE KLKHPIILRS VTRVSHVRAP
VEVEPPSPPK WGRFSKDISR FNLVPAYARE RRKALVEKWG TIGEVSAELM RVEPGGHVTI
VTSGVAYNYV KEAVRLLNID ATIIKLGMPV PIPPKIRELV KGTVVVVEEG DPIVETQLRA
LRLETKGKID GYFPKYGELN TRKVAEGIAK ALDIPYNPPQ PPKSPIEAPP RPPVLCPGCP
HMGTFYILRL ATAGLNPVWS GDIGCYSLGI NTGQQDLITH MGSSVGLGMG VAVASKQFVV
ATVGDSTFYH AVLPQLIDLA TKKVPLLVVV MDNAYTAMTG GQPSPSRLIP PEKIAETFGI
PAFVIDPADI KTSIEVTKRA VEIVKSGRPV LVVSKRPCVL VATRKARKAG VAIPKYKVEP
EKCIGCGICY NLLKCSAIQA RPDRKAYIDP ALCVGCGMCA EVCPVDAIKG DGARVKWLEV
WQQA
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