Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1738 |
Symbol | |
ID | 5054938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1564916 |
End bp | 1565710 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640469281 |
Product | hypothetical protein |
Protein accession | YP_001153941 |
Protein GI | 145591939 |
COG category | [S] Function unknown |
COG ID | [COG1578] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.500184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00181566 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGGCTGG ACGAGGCTAG TTGCAAGCTG TGTATCATAA CTTCGAGAAC CGGGGACTTA ATTAGGCTGA ATAGACCTGA CAAGTTACCG GAAATTCTAA GCGAGTTGTC CAAGTTGCTG AAGCTACAGA GCAGAAGCGA AGCTTTTTCC ACTAGTTTCA GGATAGTTGC GAAGCTTGTA GGCGACGACG ACCCGTACAG GGATTACAAG ACAAAGCTCA TCGCCATAGG GAAGAGAGTA GCCGAGGCTG TGAGGATGAG GCTTGAGCAA GCTTCTTGGG ACATAGTAAT GGCACTGAGG ATTGCCGCGG CGGCTAACAT TGTGGACACT AGCGTGTTGG GTTACAGGCC GAAGAAGCTG GAAGAGGCCG TCTGGGATCC CCCCTCTATA GAGGAGCGGG TAGAGTTGCC TAGTAGCGTA TACTACGTCT TGGACAACGC GGGAGAGGCC CAGGTAGACC TCGTCGTGGC GGAGGCACTT GAGAGGAACG GAGTTAAGTC CACGTTTGTA GTGAGAGCTC AGCCATATGA AATCGACATA ATTGAGAAAG ATATATCGAC GTATAGGGTG GTCACGACGC CGGGCAATAT ATCGCCAGTT AGGTGGATAA GGGACGGTTT TATTCTAGCA AAAGGAATAG CAAACCTAGA AGCATACCTA GAATGGGGGG AGACACCTGC CTTGCTCCTG TTCAGAGCTA AGTGCGACGT TTTGTCGAGA GTATTTTCAG TGCCAAGAAA CGCGCCTATT ATTATAAGCG GCCAAACGGC GAAGGCTATT AGCCAGTTAC GATAA
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Protein sequence | MWLDEASCKL CIITSRTGDL IRLNRPDKLP EILSELSKLL KLQSRSEAFS TSFRIVAKLV GDDDPYRDYK TKLIAIGKRV AEAVRMRLEQ ASWDIVMALR IAAAANIVDT SVLGYRPKKL EEAVWDPPSI EERVELPSSV YYVLDNAGEA QVDLVVAEAL ERNGVKSTFV VRAQPYEIDI IEKDISTYRV VTTPGNISPV RWIRDGFILA KGIANLEAYL EWGETPALLL FRAKCDVLSR VFSVPRNAPI IISGQTAKAI SQLR
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