Gene Pars_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1738 
Symbol 
ID5054938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1564916 
End bp1565710 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID640469281 
Producthypothetical protein 
Protein accessionYP_001153941 
Protein GI145591939 
COG category[S] Function unknown 
COG ID[COG1578] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.500184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00181566 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGCTGG ACGAGGCTAG TTGCAAGCTG TGTATCATAA CTTCGAGAAC CGGGGACTTA 
ATTAGGCTGA ATAGACCTGA CAAGTTACCG GAAATTCTAA GCGAGTTGTC CAAGTTGCTG
AAGCTACAGA GCAGAAGCGA AGCTTTTTCC ACTAGTTTCA GGATAGTTGC GAAGCTTGTA
GGCGACGACG ACCCGTACAG GGATTACAAG ACAAAGCTCA TCGCCATAGG GAAGAGAGTA
GCCGAGGCTG TGAGGATGAG GCTTGAGCAA GCTTCTTGGG ACATAGTAAT GGCACTGAGG
ATTGCCGCGG CGGCTAACAT TGTGGACACT AGCGTGTTGG GTTACAGGCC GAAGAAGCTG
GAAGAGGCCG TCTGGGATCC CCCCTCTATA GAGGAGCGGG TAGAGTTGCC TAGTAGCGTA
TACTACGTCT TGGACAACGC GGGAGAGGCC CAGGTAGACC TCGTCGTGGC GGAGGCACTT
GAGAGGAACG GAGTTAAGTC CACGTTTGTA GTGAGAGCTC AGCCATATGA AATCGACATA
ATTGAGAAAG ATATATCGAC GTATAGGGTG GTCACGACGC CGGGCAATAT ATCGCCAGTT
AGGTGGATAA GGGACGGTTT TATTCTAGCA AAAGGAATAG CAAACCTAGA AGCATACCTA
GAATGGGGGG AGACACCTGC CTTGCTCCTG TTCAGAGCTA AGTGCGACGT TTTGTCGAGA
GTATTTTCAG TGCCAAGAAA CGCGCCTATT ATTATAAGCG GCCAAACGGC GAAGGCTATT
AGCCAGTTAC GATAA
 
Protein sequence
MWLDEASCKL CIITSRTGDL IRLNRPDKLP EILSELSKLL KLQSRSEAFS TSFRIVAKLV 
GDDDPYRDYK TKLIAIGKRV AEAVRMRLEQ ASWDIVMALR IAAAANIVDT SVLGYRPKKL
EEAVWDPPSI EERVELPSSV YYVLDNAGEA QVDLVVAEAL ERNGVKSTFV VRAQPYEIDI
IEKDISTYRV VTTPGNISPV RWIRDGFILA KGIANLEAYL EWGETPALLL FRAKCDVLSR
VFSVPRNAPI IISGQTAKAI SQLR