Gene Pars_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1683 
Symbol 
ID5054271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1518640 
End bp1519476 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content55% 
IMG OID640469224 
Producthypothetical protein 
Protein accessionYP_001153886 
Protein GI145591884 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.269459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGAAAT ATTTAATTCT AGGCGGAGTA ACTCCCGTGG TCGAGGCTTT CCCCGCAGAC 
AGCGAGATCC CCATCCCGAA GAGAGACGCG TTGATAATAC TGGCGGTGCA CTCCTACATC
CCATCGCAGG GCAACCCCCG CGCCGAGTTC CTGGAGGCGA TCCTAAAAGA GCTCCAGGGG
AGGGACATCT CCATCACGTT TTCCATGCCT AAGTCCTACT TTGAGAAGGC GGTTAAGGTT
ATGGGCCTTG AGAAGATGGC GGGGAAGTAC GGGGCGAAGA TAGTGCAGCC GCATCAAAAC
GCCAACTATA AAATCGAGCT GGAGTCGCCG AGGGGGGCTA AGATAAGGGT TAGGGCCCTG
GAGGCGGCTT TTGACGAGTC GCTTTTGAAA ATCGTCGTGG CGATACCGGT GAGCCACCCC
CAGACGATAC TCTACCTCAC CACCCCCACG GCGGCGCTTC AGATACTGGA GCCTAAGGAC
TCGCAGAACC TTTACGAGGG GTTTAGGCCC CTCTACAAGT ACATAGCGGA GATATATAAA
ATGGAGAAGA ACACCCTGTG CATAGCCGAC GGCAAGTTCG TCATAGAGGG GGACGGCCCA
ATAAAGGGCT TCCAGAGGTA CTGGGGGGTG GCGGTGGTTG GGGAGAACTG CGCAGATGTC
GACTACGCCA CCGCCCAGGG GCTGGGGATA AATCCAGAGG ATCTGGGCTA CCTCTACTTC
TACTACGGGG GGAACTGGCC CAAGACGTCT TTGCCCCCGC TTCTGGAGAA GAATAAAATA
TCTATCAAAC TAACAAGCAA CGTGGGCATC CTCCTCAGCT GGAAAAGGGG AGTGTAA
 
Protein sequence
MGKYLILGGV TPVVEAFPAD SEIPIPKRDA LIILAVHSYI PSQGNPRAEF LEAILKELQG 
RDISITFSMP KSYFEKAVKV MGLEKMAGKY GAKIVQPHQN ANYKIELESP RGAKIRVRAL
EAAFDESLLK IVVAIPVSHP QTILYLTTPT AALQILEPKD SQNLYEGFRP LYKYIAEIYK
MEKNTLCIAD GKFVIEGDGP IKGFQRYWGV AVVGENCADV DYATAQGLGI NPEDLGYLYF
YYGGNWPKTS LPPLLEKNKI SIKLTSNVGI LLSWKRGV