Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1683 |
Symbol | |
ID | 5054271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1518640 |
End bp | 1519476 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640469224 |
Product | hypothetical protein |
Protein accession | YP_001153886 |
Protein GI | 145591884 |
COG category | [S] Function unknown |
COG ID | [COG2006] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.269459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGGAAAT ATTTAATTCT AGGCGGAGTA ACTCCCGTGG TCGAGGCTTT CCCCGCAGAC AGCGAGATCC CCATCCCGAA GAGAGACGCG TTGATAATAC TGGCGGTGCA CTCCTACATC CCATCGCAGG GCAACCCCCG CGCCGAGTTC CTGGAGGCGA TCCTAAAAGA GCTCCAGGGG AGGGACATCT CCATCACGTT TTCCATGCCT AAGTCCTACT TTGAGAAGGC GGTTAAGGTT ATGGGCCTTG AGAAGATGGC GGGGAAGTAC GGGGCGAAGA TAGTGCAGCC GCATCAAAAC GCCAACTATA AAATCGAGCT GGAGTCGCCG AGGGGGGCTA AGATAAGGGT TAGGGCCCTG GAGGCGGCTT TTGACGAGTC GCTTTTGAAA ATCGTCGTGG CGATACCGGT GAGCCACCCC CAGACGATAC TCTACCTCAC CACCCCCACG GCGGCGCTTC AGATACTGGA GCCTAAGGAC TCGCAGAACC TTTACGAGGG GTTTAGGCCC CTCTACAAGT ACATAGCGGA GATATATAAA ATGGAGAAGA ACACCCTGTG CATAGCCGAC GGCAAGTTCG TCATAGAGGG GGACGGCCCA ATAAAGGGCT TCCAGAGGTA CTGGGGGGTG GCGGTGGTTG GGGAGAACTG CGCAGATGTC GACTACGCCA CCGCCCAGGG GCTGGGGATA AATCCAGAGG ATCTGGGCTA CCTCTACTTC TACTACGGGG GGAACTGGCC CAAGACGTCT TTGCCCCCGC TTCTGGAGAA GAATAAAATA TCTATCAAAC TAACAAGCAA CGTGGGCATC CTCCTCAGCT GGAAAAGGGG AGTGTAA
|
Protein sequence | MGKYLILGGV TPVVEAFPAD SEIPIPKRDA LIILAVHSYI PSQGNPRAEF LEAILKELQG RDISITFSMP KSYFEKAVKV MGLEKMAGKY GAKIVQPHQN ANYKIELESP RGAKIRVRAL EAAFDESLLK IVVAIPVSHP QTILYLTTPT AALQILEPKD SQNLYEGFRP LYKYIAEIYK MEKNTLCIAD GKFVIEGDGP IKGFQRYWGV AVVGENCADV DYATAQGLGI NPEDLGYLYF YYGGNWPKTS LPPLLEKNKI SIKLTSNVGI LLSWKRGV
|
| |