| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1655 |
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| Symbol | |
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| ID | 5054846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1493052 |
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| End bp | 1494131 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640469198 |
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| Product | THUMP domain-containing protein |
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| Protein accession | YP_001153860 |
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| Protein GI | 145591858 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1818] Predicted RNA-binding protein, contains THUMP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.57853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.517535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGTAA TAGTAAAGAC GAGGAGGGGG TTTGAGAAAA TCGCCGCGTC GCACATTGGC
GAGGTCTTGG GACCAGGTGC TGAGGTCGAG CCGGCTCCGT TCGGCTACCT AGGCATAGTG
TTTGTGAAGG CCCCGGGTTC GGACAAGTGG GCGCTTGCCC AGCTCATAGC GCAGAAGGTG
CCAGAAGCCG ACCGCGTGTT GGTGGTGGAA AAGCTGGTGC CCGCCGACCC CGCCGAGATA
GAAAAGGCGG CGGTTGAGGT GGCCAAGCGG TACATAAATC CAGACGACAC CTTCGCCATT
AGGACTACCA GGAGGGGCTC CCATACCTTC TCCTCAATTG ACATAAACGT CAGAGTGGGC
GCCGCGGTGA AGGAGGTCAC CGGCGCCAAT GTAGACCTTG AAGAGCCCAC AAAGCCTCTA
TACGTGGAGA TTTTCCAGGA CACCGCGGCT GTGTGCATCC CAGCGACGGG GGAGTATAGA
AAGCTCCGCC GCGACAAGCC ACTTGCCTTG GGGTATCTTA GAAAGGTGGC TCTGGGACAA
TTCGTATACG AGGGCGACGA AGAGGCCGTG CGCAAAATGG GCGAGAGAAT CGGGCGGGCT
GTCCAGACGT TTGAAGTAGG CGAGCTGGTA ATCCTCCTCC ACAAGCCTAT CCCCGCCCGC
ACGTTGCGCC TCTTCGCAGA GGCTGTGGAA GAGGGCATAG AAAGCAGGTA CCAGATACAG
ACGAGGAGCT ATGGCAGGCC GGTTTGGAAA GTCCCCGTAC ACGTCTACGA GCTGTACCAG
TGGGTGAGAG ACAGAGCCGG CGAGCCCCTC ATAGTGACGG ACCCAAAAGG CGACTACGTA
ACACACGCAA AGGAGAGGCT GGCGGAGCTT TTTAAAAGCG GCAGAGTAAA CGTGCTGATA
GGGGCGAGGG AGGGCGTCCC CACAGGTGTT TTCAGATTCG CCTCATTGGT AATCGACTTG
ATACCAGAGG TCACGATAGC GACCGATTTC GTGGTCCCCG CCCTGGCCAT CGGGCTGATC
AGTGCGCTGG AGGAGGCAGG CACACTGCCC AGATACCTAG GCAAGCGGAA GAAAAAATAA
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| Protein sequence | MDVIVKTRRG FEKIAASHIG EVLGPGAEVE PAPFGYLGIV FVKAPGSDKW ALAQLIAQKV
PEADRVLVVE KLVPADPAEI EKAAVEVAKR YINPDDTFAI RTTRRGSHTF SSIDINVRVG
AAVKEVTGAN VDLEEPTKPL YVEIFQDTAA VCIPATGEYR KLRRDKPLAL GYLRKVALGQ
FVYEGDEEAV RKMGERIGRA VQTFEVGELV ILLHKPIPAR TLRLFAEAVE EGIESRYQIQ
TRSYGRPVWK VPVHVYELYQ WVRDRAGEPL IVTDPKGDYV THAKERLAEL FKSGRVNVLI
GAREGVPTGV FRFASLVIDL IPEVTIATDF VVPALAIGLI SALEEAGTLP RYLGKRKKK
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