| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1654 |
|---|
| Symbol | rps11p |
|---|
| ID | 5056274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1492610 |
|---|
| End bp | 1493026 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640469197 |
|---|
| Product | 30S ribosomal protein S11P |
|---|
| Protein accession | YP_001153859 |
|---|
| Protein GI | 145591857 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0100] Ribosomal protein S11 |
|---|
| TIGRFAM ID | [TIGR03628] archaeal ribosomal protein S11P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.789613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCGG AGCAGCAGCC GCAACAACAA CAGAAGCTCA GGTGGGGCAT AGCGTGGATA
TACTCCTCTT CAAACAACAC GATAATCACA ATTACGGATC TGACCGGCGC GGAGACTGTG
GCGAGGGTCA GCGGAGGCCA AGTGGTGAGA GCTGACAAAG ATAAGCCCTC TCCCTGGGCC
GCCATGCAGG CCGCCTACAA GGCCGCGCAA CTAGCCATGG CCCGCGGCAT AAACGCTGTG
CACATAAAAG TGAGAGGCCC AGGCGGCTAC GGCATGAAGG TTCCGGGCCC TGGGGCCTCT
GCGGCTATTA GGGCCCTCGC CAGATCGGGT TTAGTAATAG GCCGTATTGA AGACGTCACG
CCGATTCCAC ATGACATTAT AAGGCCGCCC AGCGGGCGCA AAGGCAGAAG AGTATAA
|
|---|
| Protein sequence | MSAEQQPQQQ QKLRWGIAWI YSSSNNTIIT ITDLTGAETV ARVSGGQVVR ADKDKPSPWA
AMQAAYKAAQ LAMARGINAV HIKVRGPGGY GMKVPGPGAS AAIRALARSG LVIGRIEDVT
PIPHDIIRPP SGRKGRRV
|
|---|
| |