| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1621 |
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| Symbol | |
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| ID | 5055023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1460681 |
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| End bp | 1461406 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640469162 |
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| Product | photosystem I assembly BtpA |
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| Protein accession | YP_001153827 |
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| Protein GI | 145591825 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0434] Predicted TIM-barrel enzyme |
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| TIGRFAM ID | [TIGR00259] membrane complex biogenesis protein, BtpA family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.123371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTATAG GGGTTCTCCA CCTCCTTCCA AAGGATCACC CCGACTTTTT AGACCATGCC
GTGCGGAACG CCAAGAGGCT GGATGAGGCG GGGGTAGATG CGCTAATTGT TGAGAACTAC
TACGACATGC CGTTTAAGCC CTATGCCGAC CTGCCTACAG CTATCGCGGT GGCGGTGGCG
GTCAGGGAGG TGGTGAGGGC AGTGTCTGTG CCGGTGGGGG TAAACTTGCT TAGAAACGGT
TGCAGAAAGG CGGCGGTTAT TGCGAAATAC GCAGGTGGGC GTTTTATCCG ATGCAACGCA
TATACAGACG TCGTCCTCTC CGAGTCTGGG CTCCTCATGC CACAGGCGCC CTACTTGAAG
GGCGTTAAGG TGCTTGCCGA CGTTCACGTG AAGCACGGCC TCTCGCTATA CCCGCCGACG
CTTGCCGAGG CGGTGGAGAC TGCGTCCACA AGGGCGAGCC CCGACGCGAT TATTATAACG
GGGAGTAAGA CCGGTGAGCC GCCCGACCCG GTGGACTTAG CCACAGCGAG AGCCTATACC
GACCTCCCCG TGCTGATAGG CAGCGGGATA TGTTTCTCCA CGCTAGGCAT TTTAAAAATA
GCAGATGGGG CAATTGTTGG GACTTGCCTA AAGGAGGGCA AAGAAATAGA CGTGGATAAG
GCTAGGAGGT TGGTGAGAGA GGCTAGGAGC CTTCTCTCTC CCCGGAGGCG GCTTAGTCTA
GGGTAG
|
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| Protein sequence | MLIGVLHLLP KDHPDFLDHA VRNAKRLDEA GVDALIVENY YDMPFKPYAD LPTAIAVAVA
VREVVRAVSV PVGVNLLRNG CRKAAVIAKY AGGRFIRCNA YTDVVLSESG LLMPQAPYLK
GVKVLADVHV KHGLSLYPPT LAEAVETAST RASPDAIIIT GSKTGEPPDP VDLATARAYT
DLPVLIGSGI CFSTLGILKI ADGAIVGTCL KEGKEIDVDK ARRLVREARS LLSPRRRLSL
G
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