Gene Pars_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1612 
Symbol 
ID5056275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1454735 
End bp1455859 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content56% 
IMG OID640469153 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001153818 
Protein GI145591816 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGAGG ATTTTGTAGT AACGCCCTGG GAGGTAAGGG GCAAGGTCGA CTATGAAAAG 
TTGTTGAGAC AGTTCGGCGC CAAGCCCCTC ACAGCTGAGG AGGTAGCCCT TCTTGAAAAA
TACGCCGGAG ATGTGCACCC CCTTATCAAG AGGGGGTTCT TCTACGCCCA CCGCGACTTC
GACTTCATAT TGAAGTGGCA CGGCGAGGGG AGGCCTTGGG CCCTCTACAC GGGGCGGGGT
CCCAGCGGAC CTGTACACAT CGGCCACATG GTGCCTTGGA TACTACTCAA GTGGTTCTCG
GACAAATTCG GCGTAGAGGT CTACTTCCAG ATGACAGACG ACGAGAAGTT TTTCGACGAC
CCGGAGATGA AGCTGGAGGA GGCCACCGGC TGGGCCTACG AAAACGCCCT GGACGTAATC
GCCCTTGGCT TTGGGCCAGA TAAGCTACAT CTCATAGTGG ACACAAAAGA CATAGCCCCG
CTCTACCCCA TAGCAGTCCG CGTGGCCAAG AAGCTTACTT GGAATACAGT AAAGGCCACC
TTCGGCTTTA CCGACTCCTC CAACATAGGC CTTATCTTCT ACCCCTCTCT GCAAATAGCC
GTGGCCTTCC TGCCGACAGA GCTTAAGAAA GAGCCGACGC CCGTACTCAT CCCCTGCGCC
ATTGACCAGG ACCCCTACTT CCGCCTGGCG AGGGACATAG CGGACTCCCT AAGCTACCCC
AAGCCCACGA CCCTGTACTC CAAGTTCATA ATGGCGCTGA CTGGGGAGAG CAAGATGTCT
GCATCAAACC CCGACTCGGC CATATATACC ATGGACGACG ACAAGACCGT GAAGCACAAG
ATATTGAACG CCTTCACCGG CGGCCGCCCC ACAGCTGAGG AGCAGAGGAA GTACGGCGGA
AATCCAGACA TCTGCCCCGT GTTTCACTAC CACATGCTCT TTGACCCAGA CGACGCCTCA
GTGGAGAAGA TTAGGCAAGA CTGCAAGTCT GGCGCCCTCC TCTGCGGCGA GTGCAAGCTT
AAGCTTCACG AAAAGATCTC AAAATTCCTC AAAGAGCACC GAGAAAGGAG AGAAAAGGCG
CGTGGAAAAG TAGACGAGTA CCGGCTAAGC GTGAAGCTTA AGTGA
 
Protein sequence
MGEDFVVTPW EVRGKVDYEK LLRQFGAKPL TAEEVALLEK YAGDVHPLIK RGFFYAHRDF 
DFILKWHGEG RPWALYTGRG PSGPVHIGHM VPWILLKWFS DKFGVEVYFQ MTDDEKFFDD
PEMKLEEATG WAYENALDVI ALGFGPDKLH LIVDTKDIAP LYPIAVRVAK KLTWNTVKAT
FGFTDSSNIG LIFYPSLQIA VAFLPTELKK EPTPVLIPCA IDQDPYFRLA RDIADSLSYP
KPTTLYSKFI MALTGESKMS ASNPDSAIYT MDDDKTVKHK ILNAFTGGRP TAEEQRKYGG
NPDICPVFHY HMLFDPDDAS VEKIRQDCKS GALLCGECKL KLHEKISKFL KEHRERREKA
RGKVDEYRLS VKLK