Gene Pars_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1554 
Symbol 
ID5054150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1407296 
End bp1407934 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID640469095 
Producthypothetical protein 
Protein accessionYP_001153760 
Protein GI145591758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000550683 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGGGTT GGGTTGACCA TTTCCAGTAC TACGGCCCCC TAAAGGTTGA GTTATTGGAA 
GTGCCTGAGG TATTGCTATC CTCTATTGTC TTGACGCGCT CAGAAGAGGG GTTTGAACGG
GCAGTGTCGG GCTGGTCTAA GTTCGGGACG CTGAATGTAG TAGAGGCCGT CTACGCCTAT
GTTGTACAAG CAAGGAAGGG GGTGCTGGAC AGGAGGGGGT TGTTAGAGAA GCTCATGTCG
CTGATCCCCA GCGCCACTGA GTTAGATATC TTGGCGATGC AACGGGTGTT GAAACTAGGC
CTTGACATAA CTACCTGCGA CCTTGGAGTG GTGGTGCTTT CTTACATACC AGTGAGGGGC
GGGGCGCCCC CACCTAGGTT TTTGGGCATT TTGTACGAGC TTAGGAGGAG AGACTCCACG
TTGTACATAG CCAGAAATCA AGGGGGGCCC CCGGTGTACG ACTTAGAGAC AATGTGCATA
ATCCCGGCAT CAGGCGAGGG AGAGCCACAC CCGCTTTACG ACGCCTATCT CAGAGGTTTT
AAAATCGTAA CAGAGGGTAC TCCGTCTGCA GAGGATCTGT GCGTAGCGCA TAAGAAAATC
GGCGCGAGGT GCCGGGTGTT TAAACCTGGT GTTTTTTAA
 
Protein sequence
MLGWVDHFQY YGPLKVELLE VPEVLLSSIV LTRSEEGFER AVSGWSKFGT LNVVEAVYAY 
VVQARKGVLD RRGLLEKLMS LIPSATELDI LAMQRVLKLG LDITTCDLGV VVLSYIPVRG
GAPPPRFLGI LYELRRRDST LYIARNQGGP PVYDLETMCI IPASGEGEPH PLYDAYLRGF
KIVTEGTPSA EDLCVAHKKI GARCRVFKPG VF