Gene Pars_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1525 
Symbol 
ID5054075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1384435 
End bp1384929 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID640469066 
Producthypothetical protein 
Protein accessionYP_001153731 
Protein GI145591729 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.262148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTA AGTTCGATGT TGTGGAAGTG CCCATACCCC AAGGCACCAA CGTCATCATC 
GGCCACTCCC ACTTCATAAA AACCGTCGAG GACCTCTACG AGGCCCTAGT CACCTCAGTC
CCCGGAATCA AGTTCGGCAT CGCGTTCTGC GAGGCCTCGG GAAAGCGCCT TATTAGACAC
GAGGCAAACG ACGACGAGCT GAGAAACCTC GCCATAGAGG TGTGTAAAAA AATCGCCGCA
GGCCACGTCT TCGTCATATA CATACGCAAC GCGTGGCCCA TAAACGTGCT CAACACCATT
AAAAACGTCC AGGAAGTCGT CAGGATATAC GCCGCCACAG CCAACCCGCT TAAGGTAATA
GTGGCGGAGG TAGAGCCGGA GCGCCGCGGC GTCGTCGGCG TAGTAGACGG CCACTCGCCG
CTGGGCGTAG AGACCGAGGC GGACAGAGAA GAGAGGAAGA AGTTCTTGAG AGACGTCACC
AAGTACAAAC TTTGA
 
Protein sequence
MAIKFDVVEV PIPQGTNVII GHSHFIKTVE DLYEALVTSV PGIKFGIAFC EASGKRLIRH 
EANDDELRNL AIEVCKKIAA GHVFVIYIRN AWPINVLNTI KNVQEVVRIY AATANPLKVI
VAEVEPERRG VVGVVDGHSP LGVETEADRE ERKKFLRDVT KYKL