Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1507 |
Symbol | |
ID | 5054787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1365604 |
End bp | 1366275 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640469049 |
Product | ABC transporter related |
Protein accession | YP_001153715 |
Protein GI | 145591713 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCTC TCAAAGTAGA GGGTCTTAGG GCGAGGAGGG GGAGCTTCAC GGTGGTTGTG GACAGGCTCG AGGTCAACTC TATTGTGGCG GTGGTGGGGA GGAACGGCTC TGGTAAGACC ACCCTCCTAG ACGCCGTGGC GGGGTTCATC AAGGCCGAGG GCAGGGTGGA GGTTTGTGGG GAGGATGTCT CGGCCCTCCC GCCGGAGAGG CGGAGGCTCG CATACGTCCA ATCGGTGCCG GTGGACCCGC CGATGAGGGT GGACAAGTTC CTCATGTACG TGGCGCGGAG GCATGGCACG GTGGGGGAGG TGCACAACGT GGCGGAGGTG TTGGGGGTAA AGGACTTGTT GAAGAGGAGC GAGGGCCTCT CCGCTGGCCA GAAGCAACTG GTTAATCTTG CCGCCGCCCT CCTGGCTAGG CCCTGCGCCT TTCTCATGGA TGAGCCCACT TCTCATCTGG ACTGGGTCAA CAAGAAGGCT TTTGACGACG TGTTGAAGAG GCTTGGGGTG CCGATTCTCT TCGTGACGCA CGACCCTGTG GAGGCGCTGT ACGTGGCGGA TAGGCTGTGC GTCATGGAGG AGGGCAGGCT CCGTTGCCTC GCCGACATGC CGCCGCTTGA CGTATCGGGG CTCGTCGGGG AGGTGCAAAA CTTATTAAGG CTGAACCGGT GA
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Protein sequence | MASLKVEGLR ARRGSFTVVV DRLEVNSIVA VVGRNGSGKT TLLDAVAGFI KAEGRVEVCG EDVSALPPER RRLAYVQSVP VDPPMRVDKF LMYVARRHGT VGEVHNVAEV LGVKDLLKRS EGLSAGQKQL VNLAAALLAR PCAFLMDEPT SHLDWVNKKA FDDVLKRLGV PILFVTHDPV EALYVADRLC VMEEGRLRCL ADMPPLDVSG LVGEVQNLLR LNR
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