Gene Pars_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1507 
Symbol 
ID5054787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1365604 
End bp1366275 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID640469049 
ProductABC transporter related 
Protein accessionYP_001153715 
Protein GI145591713 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCTC TCAAAGTAGA GGGTCTTAGG GCGAGGAGGG GGAGCTTCAC GGTGGTTGTG 
GACAGGCTCG AGGTCAACTC TATTGTGGCG GTGGTGGGGA GGAACGGCTC TGGTAAGACC
ACCCTCCTAG ACGCCGTGGC GGGGTTCATC AAGGCCGAGG GCAGGGTGGA GGTTTGTGGG
GAGGATGTCT CGGCCCTCCC GCCGGAGAGG CGGAGGCTCG CATACGTCCA ATCGGTGCCG
GTGGACCCGC CGATGAGGGT GGACAAGTTC CTCATGTACG TGGCGCGGAG GCATGGCACG
GTGGGGGAGG TGCACAACGT GGCGGAGGTG TTGGGGGTAA AGGACTTGTT GAAGAGGAGC
GAGGGCCTCT CCGCTGGCCA GAAGCAACTG GTTAATCTTG CCGCCGCCCT CCTGGCTAGG
CCCTGCGCCT TTCTCATGGA TGAGCCCACT TCTCATCTGG ACTGGGTCAA CAAGAAGGCT
TTTGACGACG TGTTGAAGAG GCTTGGGGTG CCGATTCTCT TCGTGACGCA CGACCCTGTG
GAGGCGCTGT ACGTGGCGGA TAGGCTGTGC GTCATGGAGG AGGGCAGGCT CCGTTGCCTC
GCCGACATGC CGCCGCTTGA CGTATCGGGG CTCGTCGGGG AGGTGCAAAA CTTATTAAGG
CTGAACCGGT GA
 
Protein sequence
MASLKVEGLR ARRGSFTVVV DRLEVNSIVA VVGRNGSGKT TLLDAVAGFI KAEGRVEVCG 
EDVSALPPER RRLAYVQSVP VDPPMRVDKF LMYVARRHGT VGEVHNVAEV LGVKDLLKRS
EGLSAGQKQL VNLAAALLAR PCAFLMDEPT SHLDWVNKKA FDDVLKRLGV PILFVTHDPV
EALYVADRLC VMEEGRLRCL ADMPPLDVSG LVGEVQNLLR LNR