Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1427 |
Symbol | |
ID | 5054788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1286813 |
End bp | 1287370 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640468968 |
Product | thymidine kinase |
Protein accession | YP_001153637 |
Protein GI | 145591635 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.038514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTATTG TAATTGTAGG GCCGATGTTC GCTGGTAAGA CCACGGAGCT TATTAGGAGA GTGGAGAGAT ACGTCATCGC GGGCAAGAGG GCTATAGTGT TTAAACCGTC TATAGACGCG AGGTACGACA GCTCAAAGGT GGCCGCCCAC AACGGCCTGA AGTTCGGGGC CTACGTAGTG CCGCCAGACG AGGCTGGCGT GGAGGCAATC GGCAAGCTGG GGCTCGATTA CGACGTGGTG GCAGTGGACG AGATTCAGTT CTTCCCCCCG AGTCTCGCTG ACGTGTTGAA CGGGCTTGCC GACGGCCGTG TGGTAATCGC CGCCGGTCTG AACTTGGACT TCCGCGGAGA GCCCTTTGAG ACTACCATGA GAACCATGGC CTTCGCAGAT AGGGTCATCT CGCTGACGGC AGTGTGCAAG GTGTGCGGGA GGCCGGCCAC GAGGACTCAG AGGCTGATAA ACGGCCTGCC CGCGCCCAGG GACAGCCCGA GGATTTTAGT AGGAGGCGGC GACTCGTACG AGGCCCGGTG CAGGCGCCAC TACGTGAGGC CTGCTTAG
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Protein sequence | MLIVIVGPMF AGKTTELIRR VERYVIAGKR AIVFKPSIDA RYDSSKVAAH NGLKFGAYVV PPDEAGVEAI GKLGLDYDVV AVDEIQFFPP SLADVLNGLA DGRVVIAAGL NLDFRGEPFE TTMRTMAFAD RVISLTAVCK VCGRPATRTQ RLINGLPAPR DSPRILVGGG DSYEARCRRH YVRPA
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