Gene Pars_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1427 
Symbol 
ID5054788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1286813 
End bp1287370 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content60% 
IMG OID640468968 
Productthymidine kinase 
Protein accessionYP_001153637 
Protein GI145591635 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.038514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTATTG TAATTGTAGG GCCGATGTTC GCTGGTAAGA CCACGGAGCT TATTAGGAGA 
GTGGAGAGAT ACGTCATCGC GGGCAAGAGG GCTATAGTGT TTAAACCGTC TATAGACGCG
AGGTACGACA GCTCAAAGGT GGCCGCCCAC AACGGCCTGA AGTTCGGGGC CTACGTAGTG
CCGCCAGACG AGGCTGGCGT GGAGGCAATC GGCAAGCTGG GGCTCGATTA CGACGTGGTG
GCAGTGGACG AGATTCAGTT CTTCCCCCCG AGTCTCGCTG ACGTGTTGAA CGGGCTTGCC
GACGGCCGTG TGGTAATCGC CGCCGGTCTG AACTTGGACT TCCGCGGAGA GCCCTTTGAG
ACTACCATGA GAACCATGGC CTTCGCAGAT AGGGTCATCT CGCTGACGGC AGTGTGCAAG
GTGTGCGGGA GGCCGGCCAC GAGGACTCAG AGGCTGATAA ACGGCCTGCC CGCGCCCAGG
GACAGCCCGA GGATTTTAGT AGGAGGCGGC GACTCGTACG AGGCCCGGTG CAGGCGCCAC
TACGTGAGGC CTGCTTAG
 
Protein sequence
MLIVIVGPMF AGKTTELIRR VERYVIAGKR AIVFKPSIDA RYDSSKVAAH NGLKFGAYVV 
PPDEAGVEAI GKLGLDYDVV AVDEIQFFPP SLADVLNGLA DGRVVIAAGL NLDFRGEPFE
TTMRTMAFAD RVISLTAVCK VCGRPATRTQ RLINGLPAPR DSPRILVGGG DSYEARCRRH
YVRPA