Gene Pars_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1370 
Symbol 
ID5056047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1233055 
End bp1233780 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content49% 
IMG OID640468915 
ProductDNA polymerase beta subunit 
Protein accessionYP_001153584 
Protein GI145591582 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG1669] Predicted nucleotidyltransferases
[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0334218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATTT TTAGAATTTT AGAGGACGCA GAGAGGAGGC TGAAGAGAAT CGAGACGTCG 
GGAGATGAAG ACGTATTGCG ATGGAATATA CACGCCGCAA TTCAAGACAT ATTGGACGTA
CTGGCGATTA TCTTCTCGGA GGAGGGCTGG AAAAAACCTC CCTCCTACAG CAAATTAGCC
CGCGAGGCTG AAGAGCGCGG CGTTATTCCA GAGGGATTAG TCCCATTTGC AAAAGTAAGA
AACGCATTGG CTCACGCGTA TAGGGAAATA GACGAGAAAG AGTTAACTGC GCTGAGAGTG
AGGGTTCTGG AGAAATTGCC TCTGTTCTTG TCGGCGCTTC GCTCTTATGT GTCGGCTAGG
GGTATAGATC CCGTTGTGGA GTGGAGTTCT TTAGCTCACG TGTTTAAACG TTGGGGTGTT
AAATTTGCAT ATCTCTTCGG CTCAAGGGCG AGGGGGCTTG AGAGAGAGGA CAGCGATTGG
GACGTCGCTG TGTATTTTGG TAGGGAGGTG ACTATAATAG AAGAGGCCGA GCTGGGGGCA
GAGCTCTCCA AGTGGCTGGA GGCAGAGGTA GATGTGGTGG CCTTAGACAA TGCGCCTCTT
GACCTGATAT ACATAGTGTT GAGAGACGGA GTTGTGATAT ACTCAGAAGA CGAAAAGTTG
CGAAAGCAGT GGGAAATTGA GACTTACCTG GAGTATTTAG ACTACGCCAG TGATTACCTC
GAATAG
 
Protein sequence
MRIFRILEDA ERRLKRIETS GDEDVLRWNI HAAIQDILDV LAIIFSEEGW KKPPSYSKLA 
REAEERGVIP EGLVPFAKVR NALAHAYREI DEKELTALRV RVLEKLPLFL SALRSYVSAR
GIDPVVEWSS LAHVFKRWGV KFAYLFGSRA RGLEREDSDW DVAVYFGREV TIIEEAELGA
ELSKWLEAEV DVVALDNAPL DLIYIVLRDG VVIYSEDEKL RKQWEIETYL EYLDYASDYL
E