Gene Pars_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1351 
Symbol 
ID5055642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1214302 
End bp1214967 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID640468897 
ProductGTP cyclohydrolase IIA 
Protein accessionYP_001153566 
Protein GI145591564 
COG category[S] Function unknown 
COG ID[COG2429] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0394455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATAAGG TGGTTTTAAT CTCGCTCAGA GGATACCGCG AGTGGACCGA GTCCTTGGGG 
CCGAGGAGAG AACATATAAT ACAAAAAGTA CAAGCCCGCA TACACGGGGC TTTATGGTCG
AGCTTCACCG CCGTCGGCGC TCTGCCCCAC CACTTTAGGT ACGACTACTT AATTGCCCTT
GCCAACAACG TGCCTCGACA CTGGATTGAT ACGGCTGTTG CAAAAATTAG GAGGTCTTCG
CCTGTAGAGG TGGATTACTG CATAGGCATG GGAGAGACTC CACTGGATGC GTATAGGAGT
TGTGGAGAGC ACAAAGAGGG AAAGGAGAGC AATGCGGTTG TGGCCCACGT AGACATAGTG
AACAGCACCG ACGCGACGCG CATAAACGGT CCTATACACA CATACCTCAG AGCATTAGAT
ATGCTTCGAA CAGCGGCTGG AGCGTGTGAA GATGTGGGTT GCATAGCCTT CTACCTAGGA
GGCGACAACA TGGTGGTGTA CCTGCCGGAG CCTAAGGCCA TATATGCATT GCTAGACCGC
GTCGAAGCGC CGGTAAGAGC CGGGGTTGGA GTGTCTCCGA GGCCATACAC TGCGTTTGTA
AAGGCCACCA AGGGGCTCGA CGCACTTAGA GCAGAGAACA AGACAGGTGT GAAAGTGGTG
AGATGA
 
Protein sequence
MHKVVLISLR GYREWTESLG PRREHIIQKV QARIHGALWS SFTAVGALPH HFRYDYLIAL 
ANNVPRHWID TAVAKIRRSS PVEVDYCIGM GETPLDAYRS CGEHKEGKES NAVVAHVDIV
NSTDATRING PIHTYLRALD MLRTAAGACE DVGCIAFYLG GDNMVVYLPE PKAIYALLDR
VEAPVRAGVG VSPRPYTAFV KATKGLDALR AENKTGVKVV R