Gene Pars_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1316 
Symbol 
ID5054329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1187836 
End bp1188333 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content53% 
IMG OID640468862 
ProductPaREP1 domain-containing protein 
Protein accessionYP_001153531 
Protein GI145591529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.16604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGC CCTGTCTGAG GTTCGGCAAG CCTTGGAAAA ATCTTAGCGA TTACAAGAAG 
GGCCGTCTCC TGGAAGCCAG GTACGGGGCC GAGTTGGCGT TGAAGTTCTT GGAGGCTGGG
CTTTATAGAA ACGCGGCTGG CAAGGCGTTT CAAGCTTGGA AGGCGTTGTT AGCAGCCATG
GCGGCCGACT ACAAGGAGGA ACTGGCAAAA AAGTTTAGGG GGGTGCGGAG GACGAGGGAC
GGCAAGAAGG TGAGCTTATC CGATTTCATA ATTGCCTTTA TGCCCACCGG CTACATGCTC
GCCGTGGCGA AAGTGCTTGA GCAACTCACC GGGAAGCCGT TGTCGGACTT AACGAACATC
GCTTTAAACC TGCACGAATT TCAATACAAC GGCCTCGACG AGGCTGGGGT CTTCAGCAGA
TATCCCAGCT TAGAGTACGT AATTGACGAT ATTAGGAAGC TCGTAGATCA AGTACTGCAA
CTCCTCCAGC AGAACTAG
 
Protein sequence
MGSPCLRFGK PWKNLSDYKK GRLLEARYGA ELALKFLEAG LYRNAAGKAF QAWKALLAAM 
AADYKEELAK KFRGVRRTRD GKKVSLSDFI IAFMPTGYML AVAKVLEQLT GKPLSDLTNI
ALNLHEFQYN GLDEAGVFSR YPSLEYVIDD IRKLVDQVLQ LLQQN