Gene Pars_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1313 
Symbol 
ID5054146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1185269 
End bp1186171 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content59% 
IMG OID640468859 
Productdihydropteroate synthase 
Protein accessionYP_001153528 
Protein GI145591526 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0586375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGATCA GGGGATATCT CGGTAGCCTA CCAGTTGGCG ACGTCTTGCC GGCAAGGGTG 
ATGGCCGTAA TAAACCTGTC ACCTGAGTCC TTCTACAAAG GGTCAGTTGC GGACGAAGAC
CCCGTAGAAA GGGCGCTATG CCTCGAGAGG CACGCGGACG TAATCGACGT GGGGGCAATG
TCCACAGCGC CGTACCTAGA GACTTGGGTC CCCCCAGAAA AGGAGCTAGA GAGGCTCAAG
AAGGCACTGC CAGAGATCAT AAAGTCGGTA AAAATCCCAG TAAGCGTCGA CACTTACAGG
CCCCAGGTGG CTGAATACGC CCTTAAGGTT GGCGCCTCTA TTATAAACGA CGTGACCGGC
GGGAAGCTCT ATCCAGAGAC GTGCAGAATC GTGGCGGACT ACGGCGCCTC GGTGGTGCTG
ATGGCCAGGG AAAGAGAGCC GAGGCCTGGC GTGGACCCAA TCACCCGCGT ATTAGACGCC
CTGCGGGACT CCGTAACCCA CTTCGAGAAA TGCGGCGTCG ATAGTGGCAG GATAGTGGTA
GACCCAGGGG TGGGGTTCCC CACCCTCCCG CCGGGAGATC AGCCGTATGT AGTCAAGGGC
GAACACCGGC ACGGCGACCC CCAGTGGCCT TGGTGGAAAT GGGACTTGTA CATATTATCG
CGCCTCCCCA GCCTCCGCGT GTTGGGCAAA CCCATACTAG TCGGCGTTTC TAGAAAGTCG
TTTCTCCGTA AAATCGCCGG CGTTGCGACC CCTGACGAGG TCCTGCCGGC GTCACTTGCC
GCGGAGGCCC TAGCGGTGTA CAAAGGCGCC CATGTAATTA GGACGCACAA CCCCGCCGAG
ACTAGGCAGG TGGTAAGACT AGCCGAGGCT CTGAGGTCAG TAGAACTCGG CAAAGAAGTC
TAA
 
Protein sequence
MVIRGYLGSL PVGDVLPARV MAVINLSPES FYKGSVADED PVERALCLER HADVIDVGAM 
STAPYLETWV PPEKELERLK KALPEIIKSV KIPVSVDTYR PQVAEYALKV GASIINDVTG
GKLYPETCRI VADYGASVVL MAREREPRPG VDPITRVLDA LRDSVTHFEK CGVDSGRIVV
DPGVGFPTLP PGDQPYVVKG EHRHGDPQWP WWKWDLYILS RLPSLRVLGK PILVGVSRKS
FLRKIAGVAT PDEVLPASLA AEALAVYKGA HVIRTHNPAE TRQVVRLAEA LRSVELGKEV