Gene Pars_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1312 
Symbol 
ID5054054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1184711 
End bp1185295 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content61% 
IMG OID640468858 
Producthypothetical protein 
Protein accessionYP_001153527 
Protein GI145591525 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0217268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGG CGCAAATCGA CGTAGAGGGG AGGAGAGTCC GATATATACA CGGCGGCTCC 
GGGAAGCCGC TTGTGATGCT TCACGGCTGG TCTTTTAATG CAGATACTTG GGTCGAGAGC
GGCATCTTCG CTAGGCTGGC CCAGCGCTAC TCGGTCTACG CTGTGGATAT GCCGTACGGG
ATAAGGAGTA AGAGCGACAA GTTCCGCGCG CCTCGGCCGG AGTATGCTGT GTTTCTCCGC
CGCGTCCTCG ACCGCCTGGG CCTTGGCGCC CCTCCGCTTG TGGGTCCAAG CGCATCGGGG
GAGGTTGTCC TCTGGTACCT GGCAAGGGGG TACCCGGCGG CGGCCGCCGT GGTGGTGGGG
CCCGTAGGCC TCACCGAGGA ATTGCTTGAA AAACTGCGCG GCGTTGAGAC GCCGATATTG
GCGATATGGG GCGACCGGGA TGAGATATCC CCACCATCCA ACGCCGAGCT CCTAAAAGAC
GTGGCGAGAG TCGTGATCCT GAAAGACGCT GGGCACCCCG CCTACTTGGA CAGGCCCGAA
GAGTTTGTAA AAGTGGTGTT AGACTTCTTT GCCGAGTTCT ACTGA
 
Protein sequence
MGEAQIDVEG RRVRYIHGGS GKPLVMLHGW SFNADTWVES GIFARLAQRY SVYAVDMPYG 
IRSKSDKFRA PRPEYAVFLR RVLDRLGLGA PPLVGPSASG EVVLWYLARG YPAAAAVVVG
PVGLTEELLE KLRGVETPIL AIWGDRDEIS PPSNAELLKD VARVVILKDA GHPAYLDRPE
EFVKVVLDFF AEFY