| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1301 |
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| Symbol | |
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| ID | 5056340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1175363 |
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| End bp | 1176679 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640468847 |
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| Product | nickel-dependent hydrogenase small subunit |
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| Protein accession | YP_001153516 |
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| Protein GI | 145591514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATAA AAAGACGTGA TTTCCTGAAG GCGTCGGCCC TCGCTTCAAT GTTGGCATCT
CTCAACTGGA GCGCCTTAGT GAAGGCGGCA GGCGAGACCA TTAGGAGCGG CGGTATAGGA
GTTGTCTGGT TTGAGGCTCA GGACTGCGCC GGCAATACGA CTGCAGTGAT CCAAGCTACT
GACCCGTCCC TTCTAGACGT TTTGCTGGGA ACGACGCCGC TGGTGGGCCC CGGCACCGTC
AGACTTCTAT TCCACCATAC TGTGATGCCG CAGTGGGGTA CGTATCACAT ACAGTCCCCC
TCTGACGTCG CTGAACATAC AAAGCTTGAG CAGTATTTAG CAACCCAGCC TCCGCCTGGC
GACGCCATGA AAATCTTAGA AGAGATCGCA GAGGGGAAGC ACGGCCCCTA CGTCTTGGTC
CTAGAAGGGA GCTTCCCCCA AGAATATGGC ATTTCGGGCT CAAACATTGA AACGAAAGGC
GGCTACTACT GCGTAGTGGG TCACAGAACA TGTACCGAGT GGGCAAAGCT CTTATTTAAA
AACGCGGCCG CGGTGGTGGC CGTGGGCAAC TGCGCTGCCT ATGGTGGGGT AGTTGCGAAC
AAGGTGTTGG AACCTCCGCC GAATTTCAAA TTCCCCACTT GGTCGCCGTC TCCCACTGGC
GCAATAGGCA TGTTCGACGA CCCGATAAGG GGAGTAAAGG GAATGATCCA CCAGCCGTAC
TTCCAGCCAG AAGTGGAGCC GTTCCGCAAG TATATTGACG AGGGAGGAGT CCCTGACTTT
AAGACAATAA AGCCAGCTGT TGCCGTGCCG GGATGTCCGG CTAACGGCAA CGGCATTCTC
AGAACTCTAG CATTACTAGT ACTAGTAGCA GGGGGGGTAT TAAAGCCCGA CGTCCTTGAG
AGAAGGGCGT TTCTCGACGA ATATGCAAGA CCGAGGTTTA TATTTGACCA AACCGTCCAC
GAGCAGTGCC CAAGGGCGGG ATCCTACGCC GCAGGCGATC TCCGCCCCTA CGCTGGCGCC
GGCGATTACA AATGCCTATT CGGGGTGGGC TGTAAGGGGC CTATTTCAAA TTGTCCGTGG
AATAAGGTGG GATGGGTCAG CGGAATAGGG GGTCCGACAA GGACGGGAGG CGTGTGTATA
GGATGTACTA TGCCCGGATT TACCGACGCC TACGAGCCAT TCTGGGCTCC ACTTAACGCG
CCAAGGTTGC CTGCAATACC CACGCTCGTG GCCGCTGTGG GGGGCGCAGC AGTGGCAGGG
TTGGCTGGCG CTTATTTAAT GACCCGCGGG GCTAAGGAAA AGGAGGAAAA GAAGTAG
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| Protein sequence | MLIKRRDFLK ASALASMLAS LNWSALVKAA GETIRSGGIG VVWFEAQDCA GNTTAVIQAT
DPSLLDVLLG TTPLVGPGTV RLLFHHTVMP QWGTYHIQSP SDVAEHTKLE QYLATQPPPG
DAMKILEEIA EGKHGPYVLV LEGSFPQEYG ISGSNIETKG GYYCVVGHRT CTEWAKLLFK
NAAAVVAVGN CAAYGGVVAN KVLEPPPNFK FPTWSPSPTG AIGMFDDPIR GVKGMIHQPY
FQPEVEPFRK YIDEGGVPDF KTIKPAVAVP GCPANGNGIL RTLALLVLVA GGVLKPDVLE
RRAFLDEYAR PRFIFDQTVH EQCPRAGSYA AGDLRPYAGA GDYKCLFGVG CKGPISNCPW
NKVGWVSGIG GPTRTGGVCI GCTMPGFTDA YEPFWAPLNA PRLPAIPTLV AAVGGAAVAG
LAGAYLMTRG AKEKEEKK
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