| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1291 |
|---|
| Symbol | |
|---|
| ID | 5054477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1167123 |
|---|
| End bp | 1167467 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640468837 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001153506 |
|---|
| Protein GI | 145591504 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5550] Predicted aspartyl protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.572601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.898959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTA CCGTAGTGGA CGTGGAAATA GGCGGGAGGA AGTACAAGGG GCTGATGGAC
ACCGGTTTTA ACGGAGAGAT TATAGTTAAC AGGAAAGTGG CGGAAGAAAT CGGGTTGAGG
CCCTTTAGGA AGAAGACAAG GGTTTTGGCC GACGGCAGAG TTGTTGCTGT AGATGTTGCA
GTCGCCGTGG TTAAGATAAA CGGCGAGGAG ACGGAGGCTT TTGTGGAAGT CTTAGAGGGC
CTCCCCCTCG ATGTTTTGAT AGGCGTACAA GCTCTTGAGA GGCTCGGCTA CGTGGTGGAT
CCAAAAACTG GGAAAATAGA GAAGTTTGGC CTTTACCTCC TCTGA
|
|---|
| Protein sequence | MGITVVDVEI GGRKYKGLMD TGFNGEIIVN RKVAEEIGLR PFRKKTRVLA DGRVVAVDVA
VAVVKINGEE TEAFVEVLEG LPLDVLIGVQ ALERLGYVVD PKTGKIEKFG LYLL
|
|---|
| |