Gene Pars_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1279 
Symbol 
ID5056229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1155907 
End bp1156668 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID640468826 
Producthypothetical protein 
Protein accessionYP_001153495 
Protein GI145591493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.237758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.157083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATAA TATCGGTCGC CGTGGCTGTT CTTGCGACTT CTGTGGTGGC GCTCGGCTTA 
GTGGTTTACA GGTTGATAAA GTCGCTGGAG GTGTACCTAA TCCCGCTCTA CGCCGAGGTT
ATAAGAAAGC GGGAGCGTGA CTACGTCCTC GTGGAGTTTT TGACCTCGCT CTTGGCATCA
AAGGGATACC TAACGCCGGC GGAGGTCGGC GCGTTGAAGA ACATTGCCCT CTCCGGCCCA
CTGACTGAGG AAGACATGGA TAGATTAGAC GAGATCCTCG GCAAAGACCC CACTCAGCTG
ACTCACGATG AGTTACTGGA CCTGAAAAAG ATCGCCTACA AGCTCCTAGC AAGACTAGAC
AAAAAGTCCG TAAGGCTGGG GCTCAAGGTG TTGAGATACG CCTCGAGAAT TGAGGAGGCC
TTTGCCAGGG GGTTTAGGCC GGTGGGGAGG GTGGAGCGGG TGGAGATGTC GTACGACGAC
GAGACCTGCA CTGTCTACGT CACTACCTAC AAAAAAGACG GGACTGTTGA GAGGAGCCAA
GGCCCAGATG CCGAGTGCGT AGCGGAGACA CTAGCAGTGC TTAAAGCCCT TGCTCGAAGA
AAAGAAGACG TAAACCCACA GCTAGCCGAA AAGGTGTTGA ATAGATACGC CAGGTGCAAG
ACAAGCAACG CGGCAGGTTG CCAAGCAATA ATACAGTCAA TCGGATCCCT AGAAAAGAAA
TCTCTAGACA TCCTGCTAAA AAAAGAAGGA AGCAACCAGT AA
 
Protein sequence
MDIISVAVAV LATSVVALGL VVYRLIKSLE VYLIPLYAEV IRKRERDYVL VEFLTSLLAS 
KGYLTPAEVG ALKNIALSGP LTEEDMDRLD EILGKDPTQL THDELLDLKK IAYKLLARLD
KKSVRLGLKV LRYASRIEEA FARGFRPVGR VERVEMSYDD ETCTVYVTTY KKDGTVERSQ
GPDAECVAET LAVLKALARR KEDVNPQLAE KVLNRYARCK TSNAAGCQAI IQSIGSLEKK
SLDILLKKEG SNQ