Gene Pars_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1278 
Symbol 
ID5055841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1154367 
End bp1155149 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID640468822 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001153494 
Protein GI145591492 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.319661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGTAG CAGTGGCGCA GGTCAGGAGG TTCGGGACGG TGGCTGAGGC TGTGAGGTGG 
TTGCTGGCGA CCGCCCAGCC GGCGGATCTC CTCGTACTGC CGGAGTACTG GCTTGGGACC
AGAGCATTGA GCGAGGCAGA TCTCCGCGCC GTCGTGGAAG AGCTGTCCAA AGTGGCCTCC
GCTATCGGAG GCTACGTTGT GGGAGGCGGG ATAGCAGTTG ACTTCGGCGG CGTTGTGAAA
AATGTCTGCC CCGTAGTCGG CCCCGGGGGG CTGGAGGCGT TGGGGGAGAA GATCTTCCCC
TCAAACGCCA CGGGGGAGCG GATCCGCGTC TCCGGAGGGA GCCGCTTAGC TCTTTTCGAG
CTGGGGGGCT GGACTGTAGG CTGCCTCATC TGCGTCGACC TGCTCTACCC CGAGCTGGCG
AGGAGGCTCG CGCTGGAGGG GGCCGACCTA ATCGTGAACC CAGCCAGCGT AACCGCGGAT
AGAGTCGAGC TGTGGAGGGC AGTGGGGCTG GCGAGGGCCT TCGAGAACTC CCTATACGTC
GCGGCGGCGC TAGGCACGGG CTACCGCTAC GCCGACGGGA GGCCGGCGGA GGGGGGTTCG
TTCATAGCCA CGCCCAACGG CGCCCTAGTA GAGTACGGGC GGGGCGAGGG GATCTACGCC
ATGGAGCTGG ACAAGAGGGA GATCGAACAC GCCAGGTCGA GGCGGCGTTA TTTGGAGGAC
GCCAAGGCCA TGCCTACCGT CTTGGTAGAG CGGCGGCACT TACCCAGAGT AAGCCTAATA
TAA
 
Protein sequence
MRVAVAQVRR FGTVAEAVRW LLATAQPADL LVLPEYWLGT RALSEADLRA VVEELSKVAS 
AIGGYVVGGG IAVDFGGVVK NVCPVVGPGG LEALGEKIFP SNATGERIRV SGGSRLALFE
LGGWTVGCLI CVDLLYPELA RRLALEGADL IVNPASVTAD RVELWRAVGL ARAFENSLYV
AAALGTGYRY ADGRPAEGGS FIATPNGALV EYGRGEGIYA MELDKREIEH ARSRRRYLED
AKAMPTVLVE RRHLPRVSLI