| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1267 |
|---|
| Symbol | |
|---|
| ID | 5054541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1143318 |
|---|
| End bp | 1143800 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640468811 |
|---|
| Product | PaREP1 domain-containing protein |
|---|
| Protein accession | YP_001153483 |
|---|
| Protein GI | 145591481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.852254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAACT CTGTGAGGGC TGAGGTTGTG AGAATTCCGC TAGATAAAAT CGCCAGGGCT
AGGCTAGAGG AGAGCAAGGC CGAGGTGGAA GTGGCGAAGA AATTTATGGA GGCGGGGCTT
TTAAGAAACG CCGCCGGTAA GGCATTTCAG GCGTGGAAGT CCTACCTCTC CTACCTGGCA
ATAAAAAACC AAGACCTCTT CCACTTCGAG GGCTATAAAC AACTGGGTAA GGGCCTAGCC
GTTCCGCGCA AAGAGTGGGT ACTGGCCGTG GTCCCCACTA CGATGCTAGC GGCCATATCC
GAAAAGCTGA GGGAAAGAGA GCCCGACGTA GTTGAGCTCA CGGCCCTTGC GCTTATCCTG
CACGAGTACC AGTACAACGG GCCGGACCCC AGCGGCGTCG TGAGCAAAAT ACCCTCCGAC
GAGGTCGCCA AGGGGCTTCT GGAACACTTC TTAAAAAAGC TCGAAGAGAA GCTGTCAAAG
TAG
|
|---|
| Protein sequence | MGNSVRAEVV RIPLDKIARA RLEESKAEVE VAKKFMEAGL LRNAAGKAFQ AWKSYLSYLA
IKNQDLFHFE GYKQLGKGLA VPRKEWVLAV VPTTMLAAIS EKLREREPDV VELTALALIL
HEYQYNGPDP SGVVSKIPSD EVAKGLLEHF LKKLEEKLSK
|
|---|
| |