Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1251 |
Symbol | |
ID | 5055489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1130462 |
End bp | 1131730 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640468794 |
Product | major facilitator transporter |
Protein accession | YP_001153467 |
Protein GI | 145591465 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0968424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.933487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATTA GGACGGTTGT CGCGGCCTCG ACTATCGGGA CCCTTATTGA GTGGTATGAT TTTTTTGCGT ACTCATCTCT CTCCCCCTTC ATAGCCGAGT ACTTTTTCCC CAAGAGTGAC CCGGCGGTTG CCATAATTTT GACGTGGCTT GTATTCGCCA CCGCCTTTGT GGTGAGGCCA GTCGGCGCCG TCTTGTTCGG CCATCTGGGA GATAGGATAG GGCGTAAGTC CACCTTCCTC ATAACGCTGA TAGTCATGGG CCTAGCCACC TTTTTCATGG GCCTAATCCC CACGTACGCC CAGGCAGGCA TCGTTGCTCC TCTGCTACTG ACATTGCTGA GGATAGTACA GGGCATCGCG CTGGGGGGCG AGTACGGCGG CGCCATCACA TACGTCTTGG AGCACGCCCC GGCGGGTAGG AGGGCTTTTT ACAACGGGTT CGTAGCCGCC ACTCCGCCCC TCGGGCTGGG CCTCTCATCC ATCACCGTGG TGTTGTCCTC GTTGCTCTTG ACAAAGGAGC AATTCGCTAC CTGGGGCTGG AGGATGCCGT TCCTCGTCTC CATTATCCTC ACGGCGCTTG GGGTATACCT GCGCTTCAAG CTTGCAGAGT CCCCCGTTTT TGAGGACATC AAAAAGAGGG GCGAGGTAGC CAGAGTACCC ATCGCCGAGG TGCTGGGGAG GCACCTACCG TGGGTGCTGG TGGGGGTGGC GGTGGCCGCT GGCCACGCGG TGTTGGCCTA CACGTCGACT GGCTACATAT TTACCTACTT GGTGCAGACA GCTAAGCGGA CGCCTGTGGA GGCCAACATT ATAGTGGGCG CCGCGGCGCT GGCGCAAATA CCCTTGTACC TATTAGCCGC GTGGCTTGGC GATAGGGTTG GGAGGAAGGC CGTCTACATG ACGGGGCTGG CCATCGGCTT GGCAACCTAC TACCCCCTCT ACTACCTCCT GCCCTCCCTT GACCTTTGGC TCGCCGCATT GGCCGTCTAC GTCATGGTTG GGGCCACCGC CTTCACATTC GGCATCTTGG GCACGGCACT TGCGGAGCTC TTCCCCGCCA GGGTTAGGTA CAGCGGGATG TCGCTGGCCT TCAACCTCGG CGTGGGGCTG TTCGGCGGCT TCACCCCCAC TATCGTCCAG CTGATAGGCA CCCTCCTCAA AAACCCGCTT GCCGGGTTGT TGCTGTACAC ATACGTCGTG GCCGCCGCGG CTCTGATAAT CGCGGCGCTC ATCCTGCCCG AGACTAAGTC AAAAGACGTC GCCGCTTAG
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Protein sequence | MSIRTVVAAS TIGTLIEWYD FFAYSSLSPF IAEYFFPKSD PAVAIILTWL VFATAFVVRP VGAVLFGHLG DRIGRKSTFL ITLIVMGLAT FFMGLIPTYA QAGIVAPLLL TLLRIVQGIA LGGEYGGAIT YVLEHAPAGR RAFYNGFVAA TPPLGLGLSS ITVVLSSLLL TKEQFATWGW RMPFLVSIIL TALGVYLRFK LAESPVFEDI KKRGEVARVP IAEVLGRHLP WVLVGVAVAA GHAVLAYTST GYIFTYLVQT AKRTPVEANI IVGAAALAQI PLYLLAAWLG DRVGRKAVYM TGLAIGLATY YPLYYLLPSL DLWLAALAVY VMVGATAFTF GILGTALAEL FPARVRYSGM SLAFNLGVGL FGGFTPTIVQ LIGTLLKNPL AGLLLYTYVV AAAALIIAAL ILPETKSKDV AA
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