| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1175 |
|---|
| Symbol | |
|---|
| ID | 5055876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1063651 |
|---|
| End bp | 1065060 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640468725 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001153398 |
|---|
| Protein GI | 145591396 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.902135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0612895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAAC AAGCCGAACC CGCGCTTAGG GCTGTCGGTA TTACAAAGTT TTTTCCCGGC
GTCGTAGCCC TAGACGGGGT AGACCTCGAG GTAAATAAAG GTGAAGTCCA CAGCCTCTTA
GGCGAGAACG GGGCCGGGAA GTCCACCCTC ATCTCAATAC TCTACGGCGT ATATGCCCCC
GACCGCGGCG AGATATATTT AAGGGGGAGG AGGATCACAA TCCACTCCCC CCGGCACGCC
GCCAAGCTGG GTATATCACT GATATCCCAA CACTTCGCCC TGGTGGAGAG CCTCACCGTA
GAGGAGAACC TCAGACTAGC CGGCATAGAC GTGGAAAAAG CCGAAAAAAT CGCTGAACAG
CTCGGCGTAG AGATAGACAT GCGGCGCTAC GTGGCGGAGC TCACCGTGGG CCAGCGGCAG
AGGCTAGAGA TAGTGAAGTC CCTGGCGAGG GAAAGCGATG TCCTCCTCAT GGACGAGCCG
ACGGCTCTTC TCAGCCCCAG GGAGGTGAAG TCGCTTTTGG CAGTGGTGAG GCGGCTTGCG
GAGATGGGAA AGGCTGTGGT ATTCGTCACA CACAAGATCA GGGAGGCGGT GGAGGTGTCC
GACAGAATCA CCGTGCTGAG GCGGGGGAAG AAAATAGCCA CATACGAGAG GCCGTTTGAC
GAAGACGCCC TCCTCGCCGC CATGTTCGAG GCCTCTGTGA AGCGCCGGGT CCACAAAGCG
AGCCGCGCCA CAAGCGAGGT GATATACCGC GCTGAGGGCC TCAAGGGGGG CAGAGTAAGG
GAAGCCACCA TAGAGCTGAG GAGGGGGGAG GTTGTCGCGG TTCTCGGCGT TGCGGGAAAC
GGCCAAGAAG AGCTGATGGA GCTACTAGCC GGCTTCAAAA AGCCCACAGG CGGCAGGATA
TTCCTCGACG GCCAGGAGCT TACGGGGCGG CCCTTTGCCG AGTTTTTAAA AAAAGGCGTC
GCCTACGTCC CCGAGGATAG GTGGCGCGCA TTGGCTAAGG AGCTGTCCGT ACTCGACAAC
TTTAAGATTA GGTGTGTTAA AAACTGCGTG GAGGCGCTCC AAGAGGCCAA GAATGAGCTG
GACATAGACT TCCCGACGCC AAGCGCCAGG GTGGCCGCCC TCTCCGGAGG CAACCAGCAG
AAGGTAATCC TAGCCAGGGA GGTGTGGCTC AGAAAACCCT ACGTCTTGAT AGCGTCTTAC
CCCACCAGAG GCCTTGACGC CGATACTTCG GAGAAGTTCT ACGCCCTGGT GAGAAGCGCT
GTGACCGGCG GCGCCGTGGT CAGCCTAGAA GACGTGGAGG AGGCCGTGGA GAAGGCTGAC
AGGATATACG TCATGTCCAG AGGCCGCATC GTTGCGTCCT TCGAGCCCCC CTTCGACATC
GGCGAAATAG CCGAGGCGAT GACACAATGA
|
|---|
| Protein sequence | MPQQAEPALR AVGITKFFPG VVALDGVDLE VNKGEVHSLL GENGAGKSTL ISILYGVYAP
DRGEIYLRGR RITIHSPRHA AKLGISLISQ HFALVESLTV EENLRLAGID VEKAEKIAEQ
LGVEIDMRRY VAELTVGQRQ RLEIVKSLAR ESDVLLMDEP TALLSPREVK SLLAVVRRLA
EMGKAVVFVT HKIREAVEVS DRITVLRRGK KIATYERPFD EDALLAAMFE ASVKRRVHKA
SRATSEVIYR AEGLKGGRVR EATIELRRGE VVAVLGVAGN GQEELMELLA GFKKPTGGRI
FLDGQELTGR PFAEFLKKGV AYVPEDRWRA LAKELSVLDN FKIRCVKNCV EALQEAKNEL
DIDFPTPSAR VAALSGGNQQ KVILAREVWL RKPYVLIASY PTRGLDADTS EKFYALVRSA
VTGGAVVSLE DVEEAVEKAD RIYVMSRGRI VASFEPPFDI GEIAEAMTQ
|
|---|
| |