| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1133 |
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| Symbol | |
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| ID | 5055935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1028634 |
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| End bp | 1029512 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640468689 |
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| Product | CRISPR-associated Cas family protein |
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| Protein accession | YP_001153363 |
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| Protein GI | 145591361 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5551] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.282696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.252203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCGA GGTTTGAGCG GCGGCCCATC TTGATGGCAT CTTCAGGGGG AGTCGCGTAT
TTAAGGGTGC GACCTCTTTG GGCTGTGTCT GTGGTGTTGG TGCGGGGGAG GCCCACTGAG
GCCGTCGCCA TGGTTGGCTT CACCGGGACG GTGGCCCAGT CACTAGTGGT GTCCCTCCTC
GGCGGGGAGC TCCACGACGC TAGGCCGAAG TCCTTCTCCG TCACGCCGTT CTTCGTCAAC
GGTAGGCCGG CGGTGGACAA GGCCGTGGCG GGGCCCGGCG ACATTCTGGA GCTCCGCGCC
GCCTTCGCCC AGAGGGAGCT CGCCGAGAGG TTCATAGCGG AGGTGGCCAA GGGCTACACC
CTCTTCGGGA GGAGGGTCGT GGTGGAGGAG CTGGAGTTCT ACGACGTGTT CTCCCAGCCC
CTCCCAGAGG CGCAGTGCTT CAAGCTGGAG TTCCTCACCC CGCTGAGATT CGCCGTGAAG
CCCCTCTACA GGCGAAGCCG CGCCGTGTTC GACTTTCTCC CGCGGCCCCT CTCGGTGTTT
AAATCCGCCG TGAGACACGG CAGGGCTCTT GGCCTATTGA AGCTGGGCGC CCCGTTCCTC
CGCTGGGTGC ATACCTACGT GGCGCTCACC GACTTCGGGT GCCGCGGCAG GTGCGTGGTC
ACCGTCAAGC TACCCAACGG CGGGGTGGCG AGGGGCTTCG TGGGCTGGGC GCTGTACCGC
TCCTTCGGCA AGAGGAGGAT CGCCGACCTG TGGAGGGCCC TCCGCGTGGC AGAGGCCTTC
AACCTCGGCA CCGGCCGAGG GATGGGCCTC GGCGTTGTGA GGGTGACCCC TCTTGACTGT
CCAGGTAACG GCCCCGCGGC TCAGCGCGGG GACGCATAG
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| Protein sequence | MEPRFERRPI LMASSGGVAY LRVRPLWAVS VVLVRGRPTE AVAMVGFTGT VAQSLVVSLL
GGELHDARPK SFSVTPFFVN GRPAVDKAVA GPGDILELRA AFAQRELAER FIAEVAKGYT
LFGRRVVVEE LEFYDVFSQP LPEAQCFKLE FLTPLRFAVK PLYRRSRAVF DFLPRPLSVF
KSAVRHGRAL GLLKLGAPFL RWVHTYVALT DFGCRGRCVV TVKLPNGGVA RGFVGWALYR
SFGKRRIADL WRALRVAEAF NLGTGRGMGL GVVRVTPLDC PGNGPAAQRG DA
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