Gene Pars_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1090 
Symbol 
ID5054240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp975417 
End bp975875 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID640468646 
Producthypothetical protein 
Protein accessionYP_001153320 
Protein GI145591318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.961462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAAATC CCAGCCGCGG CTATTTCGTG TACCTGCGCC TCCCGCCTAG GATAAAAGTG 
CTCGAGGCTC TGGGAGCCAT CGCCGACGGG AGGGTGTCGG TGGTGGGGGA GGGTCGTTGT
GAAGTGGTGT CGTCTGAGGG GGACAAGACA TACACCGTGG TGGTGGGAGA GGGCTACGCC
TACAGCGACG ACAACGGCAC GATCCACCGC GGCTACGTGG GGTACCCCAT AATCGCGTGT
CTTATGGCAG AGGGGAGGCT CCCGGTGGAC AGGGAGCTCG CCGAAAAGCT GAGGGGCATC
CCTTGGAAGA GGCTAAACGA GAGGTACAAG AGGTACGAGG AGGTCTTGCG CCACATATAC
GCAGAGAGGG GCATCGAGAG GGGGAGGGCC GAGGCCTACA TCGCCGAGGT GCTGAGGGAG
GTGGAGAAGA TGAGGCTTAG GTTCAGGCAG CAGGGTTAA
 
Protein sequence
MINPSRGYFV YLRLPPRIKV LEALGAIADG RVSVVGEGRC EVVSSEGDKT YTVVVGEGYA 
YSDDNGTIHR GYVGYPIIAC LMAEGRLPVD RELAEKLRGI PWKRLNERYK RYEEVLRHIY
AERGIERGRA EAYIAEVLRE VEKMRLRFRQ QG