Gene Pars_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1065 
Symbol 
ID5055322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp950166 
End bp950573 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content59% 
IMG OID640468621 
ProductPilT domain-containing protein 
Protein accessionYP_001153295 
Protein GI145591293 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTAG TCGTTGACGC CTCTGCTATA GCCGCATTGT ATCTACCTGA GGAGGGGAGC 
GAGCAGGTGG AAAAAGCGCT GAGCCAAGCC AGATCTCTAC ATACCCTCGA CCTAGCCGCC
TACGAGGCCG CCAACGTCGT GTGGAAGCAT ACTAGGCGCG GGCTCCTCCG GCAAGAAGAA
GCGGCTGAGC TGGTGGAGGA GGTGTTGCGG CTCCTCAAGA CCTTGGAGGT GCACACCTAC
GCAGAGGTGC TGGAGGACGC CCTCCGCCTA GCGCTTAGAC ACGGCATCAC GGTCTACGAC
GCCGCCTACG CGGCCCTAGC CGAAAAGATA GGAGGGAAGT TGCTCACCCT AGATAAGCAA
TTAGCTGAAA AACTCCCAAT AGCATTAACC CCGGATCGTC TGCGATAG
 
Protein sequence
MRLVVDASAI AALYLPEEGS EQVEKALSQA RSLHTLDLAA YEAANVVWKH TRRGLLRQEE 
AAELVEEVLR LLKTLEVHTY AEVLEDALRL ALRHGITVYD AAYAALAEKI GGKLLTLDKQ
LAEKLPIALT PDRLR