Gene Pars_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1056 
Symbol 
ID5056265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp940944 
End bp941864 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID640468612 
Producthypothetical protein 
Protein accessionYP_001153286 
Protein GI145591284 
COG category[R] General function prediction only 
COG ID[COG2248] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.730009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATCC TCCCAGTAGG CGAGGAGTCG CTGGGCGTGA GGTCGATGTG TCTCTACGTC 
GAGACCCGCG ACGTGCGCAT CCTCTTCGAC GCGGGGGTCT CCCTCGCCCC CAGGCGCTTC
GGCCTGCCGC CCCACCCGCG GGAGCTGGAG AGGGCGCGAT CCGTCAGGGG CGAGATCGTT
CGGCTGGCCC AGCAGGCGGA CATAATCACC GTGAGCCACT ACCACCGGGA CCACTTCACC
CCGTGGTACC CCAGCGTCTA CATGGCCACT GACGGGGAGA CCTACAAAAA GGTCTACGGC
GGGAAGAAGG TATTGATGAA GAGTCCAGCC GACTTGAACT GGTCCCAGCG AAGGAGGCAC
TACGGCCTCG CAAAGGCGCT TCAAGAAGCC GGCGCCAAGG CGGTGTACGC CGACGGCGGG
GAGTGGCGGA TAGGGGGCAC TGTCATAAGG GCATCTCCGC CGCTGTGGCA CGGCCCCGCC
GGGTCGAAGA CGGGTAGGGT AATCGCCTTC GCGGTGTCTG ACGGCGAGGA GAGGCTGGTC
TTTGTCCCAG ACGTGGAGGG GCCGGTAGAG CCGGAGCCAG TTGCCTTCCT AGAGGAGGTC
AAGCCCACGG TTGTTGTGGT AGGGGGACCC CCAACATACC TCGGCTGGGA GCTGGAACGA
GCTTTGCAAC GCCTTACCGA GATTATAGAC ATCGGTCCCC ACACCCTCGT CCTCGCCCAT
CACTTGCTGA GAGATCTCGC CTGGCGCGAG AAGATAGAGG CTGTGCTTCA GCGTGCTGAG
AAGAGGGGTG TCCGAGTAGC AACCTACGCC GGGCTACTGG GCAGGAAAGA TGAGCTCCTC
GAGGCTATGC GGCGAGATCT ATACGCCGCC GAGCCTGCCG CGGCTCAACC TGCAGAGGAG
GGAATCGACG AGGGTGATTA G
 
Protein sequence
MEILPVGEES LGVRSMCLYV ETRDVRILFD AGVSLAPRRF GLPPHPRELE RARSVRGEIV 
RLAQQADIIT VSHYHRDHFT PWYPSVYMAT DGETYKKVYG GKKVLMKSPA DLNWSQRRRH
YGLAKALQEA GAKAVYADGG EWRIGGTVIR ASPPLWHGPA GSKTGRVIAF AVSDGEERLV
FVPDVEGPVE PEPVAFLEEV KPTVVVVGGP PTYLGWELER ALQRLTEIID IGPHTLVLAH
HLLRDLAWRE KIEAVLQRAE KRGVRVATYA GLLGRKDELL EAMRRDLYAA EPAAAQPAEE
GIDEGD