Gene Pars_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1044 
Symbol 
ID5054690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp929971 
End bp930813 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID640468600 
Productzinc finger TFIIB-type domain-containing protein 
Protein accessionYP_001153274 
Protein GI145591272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC AGTGCCCGTT CTGCGGGGCG AAATACGAGG CGCCGCCTGG GCGTAAATTC 
TACGTCTGCC CCTACTGCGG CACAGTGTTG TCTGAGGGAA AGACCTACGA AAACGTCTAC
GTCTTCAAGC CCACTGTGGA CAAGACAGAG GCCTTTCGCA AAGCCCTCAA CTTCAGGCCC
TTCGGCGCCC CAGACGACCT CCCATCAGCC AGCCCCGAGG CCGCCGAGCT CCACTTCCTC
CCCCTGTACC TCTACCACAT CACATTCTCC CCCCTCGACG AGCTGGAGAC CTACGCCACC
GCCCTCGCCG TGTCCACGCC TCCGTTCAAA CTCCCGAAGA GATACGTCTT CCCCGCCAGG
TGGAGGACGC CCTTCAAGCC CTCCCTGGAG AAAATCGGCG TCTTCCACTC GCCTGACCTC
TCGCCGGAGG AGACCTTCAG CTCGCTGAAA GACGTGGTGG AGGAGGCCCG GGACTACGCT
TCTGTGTTCA AGGTCAGGGT TAGCATAGAG TGGAGCTTCG AAGGCATTGT CTACTACCCA
TTCTGGCAGT TAAGATACCG CTACCGTGAT AGGCCGTACG GGGCGCTGGT AGACGCCGCC
GAGGGTTCTG TCCTGGTTTT GGATTATCCC ATATCCCGAC GCGGCAGGGC AGAAGGGCTC
GGCCTCGCCG CAACGGCGAT TCTATCCTCG TCGGCTGTAG GGGCGCTGGT GGGCGCGTAC
CTCTACCTCG CCCCGGCGCT TGGGGCGCTT GGCGGCGCCC TGGCCAGTCT CGGAGCCGCC
GCTAGGCTTA TCACCTTCGC CGCGTCGCGC ACCGGAAAAT ACGAGGCGGC TTACAGGCTC
TGA
 
Protein sequence
MKIQCPFCGA KYEAPPGRKF YVCPYCGTVL SEGKTYENVY VFKPTVDKTE AFRKALNFRP 
FGAPDDLPSA SPEAAELHFL PLYLYHITFS PLDELETYAT ALAVSTPPFK LPKRYVFPAR
WRTPFKPSLE KIGVFHSPDL SPEETFSSLK DVVEEARDYA SVFKVRVSIE WSFEGIVYYP
FWQLRYRYRD RPYGALVDAA EGSVLVLDYP ISRRGRAEGL GLAATAILSS SAVGALVGAY
LYLAPALGAL GGALASLGAA ARLITFAASR TGKYEAAYRL