| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1000 |
|---|
| Symbol | |
|---|
| ID | 5055813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 892962 |
|---|
| End bp | 893495 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640468557 |
|---|
| Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
|---|
| Protein accession | YP_001153232 |
|---|
| Protein GI | 145591230 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.28179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.107428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCA AGACCCCACC GAAGTGTCCG CCCGAAGGCG ACCACTTGCT ACTCGCAAAG
ATAAAACAGG CAATTGGACC TGCATACTTG GCCCACGGCG TCACGCCTGA GGGCCACCTC
TGCGTCATGG TCCAAGCCGA CAAGATAAGG GAGGTCGCCT CTGCGGTTAA GTCCATGGGC
TTCGACCACG TCCTCTCCCT CAGCGCCATT GATTACATGG CCGAGAAGAA GTTCGTCGTT
ACATACATCT TCGCCTCATA CCTCTCGCCA GAACTCAAGG GCCAGCTCCT CCACGTCCGC
ACAGAGATCC CGCGGGACAA CCCAAAGATA GCGTCTATCG CCGACATTTT CCCCTCAGCT
GACTACGAGG AGAGAGAGTG CCATGAGATG TTCGGCATAT GGTTCGAGGG GAACACCCAC
ATGGGCAAGC GGTTCTTGCT AGACCCAGAC TGCTGCATCG ACGAGAAAAC CGGCAAGCCG
CTATACCCCC TGCGCAAAGA CTTCAAAGTC CCCGACTGGG GATTAATGGG CTGA
|
|---|
| Protein sequence | MSAKTPPKCP PEGDHLLLAK IKQAIGPAYL AHGVTPEGHL CVMVQADKIR EVASAVKSMG
FDHVLSLSAI DYMAEKKFVV TYIFASYLSP ELKGQLLHVR TEIPRDNPKI ASIADIFPSA
DYEERECHEM FGIWFEGNTH MGKRFLLDPD CCIDEKTGKP LYPLRKDFKV PDWGLMG
|
|---|
| |