Gene Pars_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0996 
Symbol 
ID5055947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp887670 
End bp888953 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content56% 
IMG OID640468552 
Productpeptidase U62, modulator of DNA gyrase 
Protein accessionYP_001153228 
Protein GI145591226 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.100891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTCA GGATACTAAC CGGTCTCGTA GACGAGGCGG CTGTTGTAAA GACGAAGGCT 
GAGCATTACA TGGCCCGCTT TGCCAACGAC GAGATTACAG TGTTCAAGCA TTGGTCAGAA
GAGGCCACAT ACCTTTACTT GGCAAAGGGC AAAAGAGCCA CCTTTGTTGG GATGACCGGA
CCGCCCACGC TGGATAAGAT CGAAGAGGCG GCGAAGAGGC TTGTCACGGT GCCGGAAGAC
CCGCTCTACG TGCCGCTGGG GGGGCCGCAG CCAGTAAACT ACAGCGAGCC TGCCGAGGGC
TTTGAAAAAA TTCCAGATCT GGTAAAAACC GCCATAGACG TAGCTGAGGG CGTGGAGCGT
AGCGCCGGCG TTGTCCACAT GATCTACATC GTGGTAGAGT ACCGGGATAC TGCAGGCAGA
TCGGGGAGCT ATTCTGCAAA CAGGGTGTAC CTGGCCATGA GATCGTTCAT CGGCGACCTC
TCGGCGACGA GCACCTCGGC GGGGAGGAAG TTGGCAGACA TAAAGGCTGA GGAGGTTGGA
AAACGCAATG CCCAAATCCT CCACGCGGCT AAGGGCCTTC CTCAGGTTAA AATTGAGCCT
CGCAGAGCAG ACGTGTTGCT GTCTCCACTA GTCTTCGGCC ACCTCATAGG CGAGGTGGCG
TCTAGCTGGG CGTCGGGCTC CGAAATACTG ACCGGCTCCT CACGCTATAC AAAGGACGAC
TTGGGGAAAG AGGTGGCCTC TCCCATCCTC ACCGTGTTGG ATATAACTTC CGATAAAGCC
GCCCACGGCT TCACGCCCTT CGATCTCGAG GGGGTGCCCA CACGTCCCAT TGAAATATAC
CGAAAGGGCA TCTTCGCCGG CGTTCTACAC ACTAGAAGGA CGGCGCATGC GCTTGGGATG
GAGCCTACGG GACACGCCTT ACGGAACTGG GCAATGCCAA GCCCCGGCCA CATATATATC
GCCCCGGCTG ACGGCCCGGA AGACGCGGAG GAGCTTTTCA GAGAGCTGAA AAACGGCTAC
TACATACACA ACAACTGGTA CACCCGCTTC CAGAACGTGA AGACGGGGCA GTTCTCCACC
GTCGGCCGAG ACGTGGTGCT GGAGATAAAA GACGGCAAGC CTGTGGCCGT TGTGAAGTTC
GTAAGAATAG CGGACACTCT TGAAAACGTG GTGAAGAACA TTGCCGTTCT CTCCAAGGAG
ACAAGCCAAG TCTACTGGTG GGACATGCCC ACGCCTGTCC ATGCGCCATA CGCCGTGTTG
AAAAACATCG GAATAACTAC ATAA
 
Protein sequence
MIFRILTGLV DEAAVVKTKA EHYMARFAND EITVFKHWSE EATYLYLAKG KRATFVGMTG 
PPTLDKIEEA AKRLVTVPED PLYVPLGGPQ PVNYSEPAEG FEKIPDLVKT AIDVAEGVER
SAGVVHMIYI VVEYRDTAGR SGSYSANRVY LAMRSFIGDL SATSTSAGRK LADIKAEEVG
KRNAQILHAA KGLPQVKIEP RRADVLLSPL VFGHLIGEVA SSWASGSEIL TGSSRYTKDD
LGKEVASPIL TVLDITSDKA AHGFTPFDLE GVPTRPIEIY RKGIFAGVLH TRRTAHALGM
EPTGHALRNW AMPSPGHIYI APADGPEDAE ELFRELKNGY YIHNNWYTRF QNVKTGQFST
VGRDVVLEIK DGKPVAVVKF VRIADTLENV VKNIAVLSKE TSQVYWWDMP TPVHAPYAVL
KNIGITT