Gene Pars_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0988 
Symbol 
ID5055443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp880784 
End bp881584 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content56% 
IMG OID640468544 
Productstationary phase survival protein SurE 
Protein accessionYP_001153220 
Protein GI145591218 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00114073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGAATCT TAATTACAAA TGACGACGGC GTGCACAGCC CGGGGCTGAG ACTACTCTAC 
GAATTCGCAT CCCCCCTCGG CGCTGTAGAT GTGGTTGCGC CGGAGTCACC CAAGTCGGCC
ACAGGGCTCG GCATCACCCT CCACAAGCCG CTTAGGATGT ACGAGACAGA CCTATGTGGC
TTTAAGGCCG TGGCCACGTC GGGCACGCCT TCAGATACGA TATACCTAGC CGCATACGGC
CTCGGCAGGA GATACGACTT AGTTCTGTCG GGGATAAACC TCGGCGACAA CACCTCGCTC
CAAGTCATCC TCTCTTCGGG GACTCTCGGA GCCGCTTTCC AAGCCGCCTT GTTGGGCATA
CCGGCAGTTG CCTACTCCCT ACACGCACAG GACTGGGAGG AGGTCTTAAA AAATAGGGAG
GCCCTAGAGA TAATGAAAGC GGTGGTTCAG AAATCGGCGG AATTCGTGCT GAAGTATGGA
CTCCCCCACG GCGTCGATGT GGTCAGTATT AACTTCCCCA GAAACATGAA GAGGGGAGTC
AAGGCAAAAC TGGTCCGGGC GGCTAAATTC CGCTTTGCGC AGAAAGTAGA CAGGCGAGTC
GACCCCCGCG GATCTAGCTA CTACTGGCTA TACGGCACAG ACCTCGCCCC CGAGCCAGAT
ACAGACGTGT ACACAGTGTT AGTAGAGGGG CAAATAGCTG TGACGCCGCT GACGCTTGAC
CTAAACGCCC TCAACACCGA CAGGAAACTA GACGCCGAAG CCTTAGCAAA ACTAGTCCGC
TACATCAACG AGGCAATATG A
 
Protein sequence
MRILITNDDG VHSPGLRLLY EFASPLGAVD VVAPESPKSA TGLGITLHKP LRMYETDLCG 
FKAVATSGTP SDTIYLAAYG LGRRYDLVLS GINLGDNTSL QVILSSGTLG AAFQAALLGI
PAVAYSLHAQ DWEEVLKNRE ALEIMKAVVQ KSAEFVLKYG LPHGVDVVSI NFPRNMKRGV
KAKLVRAAKF RFAQKVDRRV DPRGSSYYWL YGTDLAPEPD TDVYTVLVEG QIAVTPLTLD
LNALNTDRKL DAEALAKLVR YINEAI