Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0988 |
Symbol | |
ID | 5055443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 880784 |
End bp | 881584 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640468544 |
Product | stationary phase survival protein SurE |
Protein accession | YP_001153220 |
Protein GI | 145591218 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00114073 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAGAATCT TAATTACAAA TGACGACGGC GTGCACAGCC CGGGGCTGAG ACTACTCTAC GAATTCGCAT CCCCCCTCGG CGCTGTAGAT GTGGTTGCGC CGGAGTCACC CAAGTCGGCC ACAGGGCTCG GCATCACCCT CCACAAGCCG CTTAGGATGT ACGAGACAGA CCTATGTGGC TTTAAGGCCG TGGCCACGTC GGGCACGCCT TCAGATACGA TATACCTAGC CGCATACGGC CTCGGCAGGA GATACGACTT AGTTCTGTCG GGGATAAACC TCGGCGACAA CACCTCGCTC CAAGTCATCC TCTCTTCGGG GACTCTCGGA GCCGCTTTCC AAGCCGCCTT GTTGGGCATA CCGGCAGTTG CCTACTCCCT ACACGCACAG GACTGGGAGG AGGTCTTAAA AAATAGGGAG GCCCTAGAGA TAATGAAAGC GGTGGTTCAG AAATCGGCGG AATTCGTGCT GAAGTATGGA CTCCCCCACG GCGTCGATGT GGTCAGTATT AACTTCCCCA GAAACATGAA GAGGGGAGTC AAGGCAAAAC TGGTCCGGGC GGCTAAATTC CGCTTTGCGC AGAAAGTAGA CAGGCGAGTC GACCCCCGCG GATCTAGCTA CTACTGGCTA TACGGCACAG ACCTCGCCCC CGAGCCAGAT ACAGACGTGT ACACAGTGTT AGTAGAGGGG CAAATAGCTG TGACGCCGCT GACGCTTGAC CTAAACGCCC TCAACACCGA CAGGAAACTA GACGCCGAAG CCTTAGCAAA ACTAGTCCGC TACATCAACG AGGCAATATG A
|
Protein sequence | MRILITNDDG VHSPGLRLLY EFASPLGAVD VVAPESPKSA TGLGITLHKP LRMYETDLCG FKAVATSGTP SDTIYLAAYG LGRRYDLVLS GINLGDNTSL QVILSSGTLG AAFQAALLGI PAVAYSLHAQ DWEEVLKNRE ALEIMKAVVQ KSAEFVLKYG LPHGVDVVSI NFPRNMKRGV KAKLVRAAKF RFAQKVDRRV DPRGSSYYWL YGTDLAPEPD TDVYTVLVEG QIAVTPLTLD LNALNTDRKL DAEALAKLVR YINEAI
|
| |