Gene Pars_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0952 
Symbol 
ID5056100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp841848 
End bp842549 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content50% 
IMG OID640468508 
Productformate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit) 
Protein accessionYP_001153184 
Protein GI145591182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.568502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG AAATAGTTAG TATTGGATAT AAAATAGCGC ACCATTGGAA TTTGATATTG 
TTTACAATCC TGGCCTTGAC AGGTTCTGTA CTTTTTAGCA TAGAACTGAT GGGTTGGCTT
GCCTACGCCG TCGGTGCACC TCTCTCGGCC GTACTTGACG TTGATCCACT TACCGCGGGC
GTCCAGCTTG TCAGGACTAG CCACCGCTTT ATCGGCTTCG TATGGGGAGC CTTGCTCACG
GTATACGGTC TGTATCTCCT AGTCTTTAGA AGAGTAGAAG TATTCAAGCC CTTGAAGAAG
CCGATTGGAC AGCAGATTAG AGAGGCAAAG GCCATCGCGG CCCACTACAT GCTTGGTAGG
CCGATGCCGA AAGACATAGA AGAGAGCCTA GATAGGCACA ACATACTTGT CTCCTACATG
GCACTATTGT TGTTTATATC CATCGTCCTC TTCGGCATAA GCGGCGTTGG GCTAGTTTTT
AGGGATTCGC TAGGCCTCTC CTCGGCTACT GCTGGGGTTC TCCTGCTCCT CCACGACGTG
GCCTTTGCCC TCGGCCTCCT CTTCGTCGCT ATGCACCTCT TTGCAGTTAC CCACCCGAGT
AATAGGCCGC TTCTCAACGC GATGTTTGGC GACGGGACTA TTGAACTTGA ATGGGCTAAG
AAGCATATGC CGAAGTTTCT GAGCAGACGT GGAGTTAGAT AA
 
Protein sequence
MKIEIVSIGY KIAHHWNLIL FTILALTGSV LFSIELMGWL AYAVGAPLSA VLDVDPLTAG 
VQLVRTSHRF IGFVWGALLT VYGLYLLVFR RVEVFKPLKK PIGQQIREAK AIAAHYMLGR
PMPKDIEESL DRHNILVSYM ALLLFISIVL FGISGVGLVF RDSLGLSSAT AGVLLLLHDV
AFALGLLFVA MHLFAVTHPS NRPLLNAMFG DGTIELEWAK KHMPKFLSRR GVR