| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0934 |
|---|
| Symbol | |
|---|
| ID | 5054907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 826082 |
|---|
| End bp | 826501 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640468490 |
|---|
| Product | PaREP1 domain-containing protein |
|---|
| Protein accession | YP_001153166 |
|---|
| Protein GI | 145591164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000142173 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGGCC TGGGCCACAA TCGGCGCCAC GAGAGAGACA ACATGTACGA GGCTGAGCTG
GCTGAGGAGT TTCTCAAAAA CGGCCTTCTG CGCGACGCCG CCGGCAAGGC ATTCCAGGCT
GTGAAGGCGT ATTTAGCGGC GGCCGCCGCA CAGAAGAGGG AGGCGCTGGC GCCCCACTAC
CCAGTCGAGA AGGCCGTGCA GAAGAGGAGA GTGGCGGTCG TCGACCTCAT TGTCGCCTAC
ATGCCCACCA CTAGGATGAA AGAAGTGGCG GCGAGACTCG GCGATAATGA GCTTGAACTC
GTGGTGGAAA AGGCCCTAGA CCTGCGCCAA TTTCAATACA ACGGGTTAGA CAAAGAGAGT
GTCTTCTCCA GATACGTCGC GACTGAGATA GTGGAGAAAG ACGTCAGGGA CGTTGTGTAG
|
|---|
| Protein sequence | MEGLGHNRRH ERDNMYEAEL AEEFLKNGLL RDAAGKAFQA VKAYLAAAAA QKREALAPHY
PVEKAVQKRR VAVVDLIVAY MPTTRMKEVA ARLGDNELEL VVEKALDLRQ FQYNGLDKES
VFSRYVATEI VEKDVRDVV
|
|---|
| |