Gene Pars_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0928 
SymbolhemA 
ID5054302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp821801 
End bp822964 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content53% 
IMG OID640468484 
Productglutamyl-tRNA reductase 
Protein accessionYP_001153160 
Protein GI145591158 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.878615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAG TCAACGGCTT AGTTGCTCTT TCCCTGACGC ATAAGGAGCT CGGCGTTGAC 
GAGTTGTCGA AGGTTGCTAA CGGCGTACAT AGGGTATGTG TGTCGTTGCG GCAACCTCTC
TTTGTACTAC ACACGTGTAA CAGGGTAGAG GCATACTTAT ACAACCCGCC AGATGAGGTG
GTTGAAATCG TCAAGAGCGG CTACGCGCCT TATGTCGAAA AAGTCGTAGA ACGCCGCGGC
GTCGATGCGG CCCGTCATCT TTTCCGCGTG GCGGCTGGGC TTGAATCTAT GCTCATCGGC
GAGACGGACG TCTTGGGCCA GCTAGAGGAG GCGTTTGATA GACAAGTTAG GGCCGGCTAC
ACCCGTGAGC TTTTGAAGAC TGTGGTGGAG AGAGCTATAA GGGTGGGGAA GAGAGTAAGG
ACGGAGACTG GCATTTCTCG GGGGCCCAGA GGGCTCGGCT CGTTGTCTAT ACTCTATGTG
AAGGAAAAGA TCGATTTGAC CAACGCCCGC GTATGCGTCA TTGGGGCAGG CTCTGTTGGC
CGCGGCTTGG TGAAAGAGCT CATAGACGCA GGTGCGAGGC GCTTGGTGGT GGTGAACCGC
TCTGTGGAGA AAGCCGCTGA CCTCGGCGTC GAGGTTTGGC CGCTGTCTGA GCGATCTGTG
GAGAGGTGTC TTGAGGATTT TGATGTCGTT TTTACTGCTG TGGCTACTTT TGAACCAATA
ATAAAAAGCG TGCCAAGAGA CGCCAGAGTC CGTATTATTG TAGACATGGG AATGCCTAGA
AACACCGCCG CGGGTCTCCC AGTGGAGGTG GTCACCATAG ACTCCCTTAG GGACTTAGCT
GACCGCTTCA ACGCCATGAG AGATGCGGAG ATTAAAAAGG CGGAGGAGAT AGTCGAGGAG
GAATTGGTGG CGCTTGAGCG TTTACTCAGG ATTAGGTGGG TAGAGGAGGT ATCTGCCAAG
CTACTAGAGT ACTGGTTTAA AATCGCCGAG GAAGAAGGCG AAAGGGCCGG TGGGTTGGAG
GCGAAGATCG CGGCGCGCAC GACTGTGAAG CGGACGTTGC TACCCGTTGT TAATTACTTG
AAGAAGGTAG CTGTTTCAGA CATAGATGAG GCCTACAGAA TAATCTCAGT TCTGAGGCTT
TCCTATGGGC TCAAAGATTT ATAA
 
Protein sequence
MDLVNGLVAL SLTHKELGVD ELSKVANGVH RVCVSLRQPL FVLHTCNRVE AYLYNPPDEV 
VEIVKSGYAP YVEKVVERRG VDAARHLFRV AAGLESMLIG ETDVLGQLEE AFDRQVRAGY
TRELLKTVVE RAIRVGKRVR TETGISRGPR GLGSLSILYV KEKIDLTNAR VCVIGAGSVG
RGLVKELIDA GARRLVVVNR SVEKAADLGV EVWPLSERSV ERCLEDFDVV FTAVATFEPI
IKSVPRDARV RIIVDMGMPR NTAAGLPVEV VTIDSLRDLA DRFNAMRDAE IKKAEEIVEE
ELVALERLLR IRWVEEVSAK LLEYWFKIAE EEGERAGGLE AKIAARTTVK RTLLPVVNYL
KKVAVSDIDE AYRIISVLRL SYGLKDL