Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0887 |
Symbol | |
ID | 5054857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 786278 |
End bp | 787909 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640468448 |
Product | coenzyme A transferase |
Protein accession | YP_001153124 |
Protein GI | 145591122 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.499816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAGGA AATTTGTCTC CGCTCCTGAG GCTATTTCTA AGATTCCAGA TAATGCCGTA GTGGCGATTT CGGGCTTCAA CGCGGCGACG TCGCCCTTCT ATCTTATTGA CGAATTGATA AATGCTTACA GGAAAAGTGG GCATCCTAGA AACTTGTTTA TTATCTCTGA CGCCATACCT GCCATCCCGG GTTTTGGCTT AGATAAAATC GGGAAGCTGA TTCTAGAAAA TCCCGACCAG GATTTTGTCA GAGGTTTTCT TCTGCCGTTC TACGGCTGGG CCCCGGAGTT GCAGAAGGCT GTAATTAAGA ACTTAGTCGA GGCCTATACC TGGCCTATAG GCATAGTTAC GAGGTGGCTG AGGACGGTGG CTGTCGGTGC TCCGGGCGTC TTCAGCAGAG TGGGGCTGGG TACTTTTATA GATCCTCGCC AAGACGGCGG TTTTCTCAAC GACTTGGCAA AAGAGAGGAA GACAGTAACA ATTGAACTTG TTGAAATGGG GAGAAGAGAG TACCTACTCT ACAAGGCGCC GAAGCCTAAT GTTGGGCTTA TAAGAGCCAC GACGGCGGAT GAGATCGGTA ATTTGAGCAT GGAGCAGGAG GCTATTTACG GCTCGGTGTT GTCAATTGTT GAAGCCGTCA AGGCCCATCC CGGCGGCGTT GTCATCGCCC AGGTCTTGCG AACTGTGACG CTTGGGGAGA TCCACCCCAA ACACGTCGTT GTGCCCGGGC CTCTAGTCGA CTATGTGGTG GTTACTAGGA GGGGGACCGA GGTGGAGAAA TACCACTGGC AAACTGCATC TTTCGACTTA AACCCAATTA TCAGCGGGGA TGAGCCGTAT AAAGTAGCTT ATGAGCCAGT CCCCCTCACA GCGGAAAAGG TTATAGCAAG GAGAGTTGTG GTAGAGCTTG TAAATCTCGT GAAGAAGCTC GGCAGGCCGG TGATCGTGAA CCTAGGCATC GGCATCCCGG CGTTGGCCGC CGACGTGATA AGAGAAGAAC AGCTCGACGA TTTTATCCAC CTAACAGTTG AATCGGGGCC GTGGGGCGGA ATTGCTCTGC CAGATGCCGA CTTCGGCGCC GCGATGGGAC ACTACGCAGT TATCCCACTA CCTGAACAAT TTGTTTTGTA CGAGGGAGGC GCAATAGACG CCACTTCGCT CGGCTTCATG CAAGTAGACA GGGAGGGCAA CGTCAATCCG GCGTTTCTCC CCGGCAGGTT GCCCGGCCCC GGCGGGTTCC CCGTAATAGC GCTTGGCTCG CCTAGGGTCT ACTTCGCTGG GGGCTTTACA GCGGGTAAGC GGAATATCAG AGTAAAGGAC TGCAAGCTTG TTGTGGAGGA GGAGCCGATT ATAAAGTTCG TAGAGAAAGT CTACAAGATC GTCTTCAGCG GCAGATACGC AGTAGAGGAG GGGAAAGAGG TGATGTACAT TACCGAACGT GCCGTCTTTC GACTAACGCC GGGAGGCGTG GAGCTGGTGG AGGCGGCTCC AGGCATAGAC ATCGAAAAAG ACGTGTTGTC AAAAATGGAG TTTAAGCCCG TTGTTAGGCG CGTGGATGAA ATGGACGAGA GATTGTTCTG CGATAAGAAG CTTGGACTCA GGGAAGAGGC GCTGGAGATA GTTAAAAGGT AG
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Protein sequence | MIRKFVSAPE AISKIPDNAV VAISGFNAAT SPFYLIDELI NAYRKSGHPR NLFIISDAIP AIPGFGLDKI GKLILENPDQ DFVRGFLLPF YGWAPELQKA VIKNLVEAYT WPIGIVTRWL RTVAVGAPGV FSRVGLGTFI DPRQDGGFLN DLAKERKTVT IELVEMGRRE YLLYKAPKPN VGLIRATTAD EIGNLSMEQE AIYGSVLSIV EAVKAHPGGV VIAQVLRTVT LGEIHPKHVV VPGPLVDYVV VTRRGTEVEK YHWQTASFDL NPIISGDEPY KVAYEPVPLT AEKVIARRVV VELVNLVKKL GRPVIVNLGI GIPALAADVI REEQLDDFIH LTVESGPWGG IALPDADFGA AMGHYAVIPL PEQFVLYEGG AIDATSLGFM QVDREGNVNP AFLPGRLPGP GGFPVIALGS PRVYFAGGFT AGKRNIRVKD CKLVVEEEPI IKFVEKVYKI VFSGRYAVEE GKEVMYITER AVFRLTPGGV ELVEAAPGID IEKDVLSKME FKPVVRRVDE MDERLFCDKK LGLREEALEI VKR
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