Gene Pars_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0887 
Symbol 
ID5054857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp786278 
End bp787909 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content53% 
IMG OID640468448 
Productcoenzyme A transferase 
Protein accessionYP_001153124 
Protein GI145591122 
COG category[I] Lipid transport and metabolism 
COG ID[COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.499816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAGGA AATTTGTCTC CGCTCCTGAG GCTATTTCTA AGATTCCAGA TAATGCCGTA 
GTGGCGATTT CGGGCTTCAA CGCGGCGACG TCGCCCTTCT ATCTTATTGA CGAATTGATA
AATGCTTACA GGAAAAGTGG GCATCCTAGA AACTTGTTTA TTATCTCTGA CGCCATACCT
GCCATCCCGG GTTTTGGCTT AGATAAAATC GGGAAGCTGA TTCTAGAAAA TCCCGACCAG
GATTTTGTCA GAGGTTTTCT TCTGCCGTTC TACGGCTGGG CCCCGGAGTT GCAGAAGGCT
GTAATTAAGA ACTTAGTCGA GGCCTATACC TGGCCTATAG GCATAGTTAC GAGGTGGCTG
AGGACGGTGG CTGTCGGTGC TCCGGGCGTC TTCAGCAGAG TGGGGCTGGG TACTTTTATA
GATCCTCGCC AAGACGGCGG TTTTCTCAAC GACTTGGCAA AAGAGAGGAA GACAGTAACA
ATTGAACTTG TTGAAATGGG GAGAAGAGAG TACCTACTCT ACAAGGCGCC GAAGCCTAAT
GTTGGGCTTA TAAGAGCCAC GACGGCGGAT GAGATCGGTA ATTTGAGCAT GGAGCAGGAG
GCTATTTACG GCTCGGTGTT GTCAATTGTT GAAGCCGTCA AGGCCCATCC CGGCGGCGTT
GTCATCGCCC AGGTCTTGCG AACTGTGACG CTTGGGGAGA TCCACCCCAA ACACGTCGTT
GTGCCCGGGC CTCTAGTCGA CTATGTGGTG GTTACTAGGA GGGGGACCGA GGTGGAGAAA
TACCACTGGC AAACTGCATC TTTCGACTTA AACCCAATTA TCAGCGGGGA TGAGCCGTAT
AAAGTAGCTT ATGAGCCAGT CCCCCTCACA GCGGAAAAGG TTATAGCAAG GAGAGTTGTG
GTAGAGCTTG TAAATCTCGT GAAGAAGCTC GGCAGGCCGG TGATCGTGAA CCTAGGCATC
GGCATCCCGG CGTTGGCCGC CGACGTGATA AGAGAAGAAC AGCTCGACGA TTTTATCCAC
CTAACAGTTG AATCGGGGCC GTGGGGCGGA ATTGCTCTGC CAGATGCCGA CTTCGGCGCC
GCGATGGGAC ACTACGCAGT TATCCCACTA CCTGAACAAT TTGTTTTGTA CGAGGGAGGC
GCAATAGACG CCACTTCGCT CGGCTTCATG CAAGTAGACA GGGAGGGCAA CGTCAATCCG
GCGTTTCTCC CCGGCAGGTT GCCCGGCCCC GGCGGGTTCC CCGTAATAGC GCTTGGCTCG
CCTAGGGTCT ACTTCGCTGG GGGCTTTACA GCGGGTAAGC GGAATATCAG AGTAAAGGAC
TGCAAGCTTG TTGTGGAGGA GGAGCCGATT ATAAAGTTCG TAGAGAAAGT CTACAAGATC
GTCTTCAGCG GCAGATACGC AGTAGAGGAG GGGAAAGAGG TGATGTACAT TACCGAACGT
GCCGTCTTTC GACTAACGCC GGGAGGCGTG GAGCTGGTGG AGGCGGCTCC AGGCATAGAC
ATCGAAAAAG ACGTGTTGTC AAAAATGGAG TTTAAGCCCG TTGTTAGGCG CGTGGATGAA
ATGGACGAGA GATTGTTCTG CGATAAGAAG CTTGGACTCA GGGAAGAGGC GCTGGAGATA
GTTAAAAGGT AG
 
Protein sequence
MIRKFVSAPE AISKIPDNAV VAISGFNAAT SPFYLIDELI NAYRKSGHPR NLFIISDAIP 
AIPGFGLDKI GKLILENPDQ DFVRGFLLPF YGWAPELQKA VIKNLVEAYT WPIGIVTRWL
RTVAVGAPGV FSRVGLGTFI DPRQDGGFLN DLAKERKTVT IELVEMGRRE YLLYKAPKPN
VGLIRATTAD EIGNLSMEQE AIYGSVLSIV EAVKAHPGGV VIAQVLRTVT LGEIHPKHVV
VPGPLVDYVV VTRRGTEVEK YHWQTASFDL NPIISGDEPY KVAYEPVPLT AEKVIARRVV
VELVNLVKKL GRPVIVNLGI GIPALAADVI REEQLDDFIH LTVESGPWGG IALPDADFGA
AMGHYAVIPL PEQFVLYEGG AIDATSLGFM QVDREGNVNP AFLPGRLPGP GGFPVIALGS
PRVYFAGGFT AGKRNIRVKD CKLVVEEEPI IKFVEKVYKI VFSGRYAVEE GKEVMYITER
AVFRLTPGGV ELVEAAPGID IEKDVLSKME FKPVVRRVDE MDERLFCDKK LGLREEALEI
VKR