Gene Pars_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0862 
Symbol 
ID5054238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp765041 
End bp766006 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID640468422 
Productphosphoesterase, DHHA1 
Protein accessionYP_001153099 
Protein GI145591097 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGGC GGTTGACAAT ACTGGCACAC GGCGACGCAG ACGGGGTCTG CTCGGCGGCA 
CTAGTGAAGG CGGCGCTAAG AGATCAGTAC AGCGAAATTC AGGTGGTATT CACCCACCCT
GTGGATCTGG TCAAGGACTT CCAGCAATAC GCAAGGGGAG ACGTCTACAT AGTAGACGTG
GCGATAGATG AGAAGGCGGC CCAGGAGGTG CAAAAACTAT TTAGAGCCTA CGGCGGCAGG
GTCGTGTACA TCGACCACCA CCCCCTGTCA GCTGATTTGG CCGGAGCTGA GGTGATCCAC
GAAGAGGGCC CCTCCGCCTC GGAGCTCACC TATAGGAAGC TAGGCGGCTT GTTGCCTCCT
TCTTATAGCC GGGTTGCGCT GTACGGCGCC ATTAGCGACT ACATGGACTA CACAGAGTGG
GTCAAGTCGG CGCTGGAAAA GTGGGACAAG CGTATTGTAT ACTTCGAGGC CGGGGTCCTA
ATGCAGGGCC TAGAGCGGGC GCGCAAAGAC CACGACTTCA AGCGGGCGGT GGTGGACCAC
CTAGCCGAGA ACAGGACGCC CTCCTCCATG GAGAGGCTCA TGAAGCTGGC GGAGGAGCAA
GCGGGGATAA ACGAGGCCCT GGTGGGCTGG GTTGAGAGAT ACGTGGCTAA GAGAGGCGGC
GTCGCCTTCG TCGTCAATCC ACCAGGCCCC CTCGGCCTCG CGGCCAACTT AGCGAGGGGT
CTCACAGACT CGCCCGTGGG AATAGCGGCG GAGGAGCGGG GTGACATATA CGTGATGAGC
CTCCGCTCTG TCCAAGTGGA CCTAAACCAG TTTCTAAGGG ATTTTGCCCG GCGCTATTCC
GTATCTGGCG GCGGCCACAA AAACGCCGCG GGGGCGCGCA TCCCGAAGCG CCTTTTCGAC
GTCTTCGTAG AGGAGCTCAG CTCGTATATA TCACGGCTGA GATGGGGCCC TGCTTTCTCT
CAATAG
 
Protein sequence
MGRRLTILAH GDADGVCSAA LVKAALRDQY SEIQVVFTHP VDLVKDFQQY ARGDVYIVDV 
AIDEKAAQEV QKLFRAYGGR VVYIDHHPLS ADLAGAEVIH EEGPSASELT YRKLGGLLPP
SYSRVALYGA ISDYMDYTEW VKSALEKWDK RIVYFEAGVL MQGLERARKD HDFKRAVVDH
LAENRTPSSM ERLMKLAEEQ AGINEALVGW VERYVAKRGG VAFVVNPPGP LGLAANLARG
LTDSPVGIAA EERGDIYVMS LRSVQVDLNQ FLRDFARRYS VSGGGHKNAA GARIPKRLFD
VFVEELSSYI SRLRWGPAFS Q