| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0803 |
|---|
| Symbol | |
|---|
| ID | 5055342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 715217 |
|---|
| End bp | 716683 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640468364 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_001153041 |
|---|
| Protein GI | 145591039 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0138093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTA TCAGAGAGGC GAGACCCCAC GGCCGGGAGA AGCTTAGGGC AAATCTGATA
GAGTGGTTCC ACTGGCTTCT TAGAGAGGCT GAGCTGTACG ACGTGAGGTA CCCCGTCAAA
GGGGCGTATG TGTGGAGGCC CTATGGGATG AGGCTGAGGC GCCATGTGGA GGAGCTGATT
AGGAGAAGCC ACGATGAGAC TGGGCACCAG GAGGTGTTGT TCCCCGTGTT TATTCCCTAC
GAGTTTTTTG GTAAGGAGTC CCAGCACATT AGGGGGTTTG AGAAGGAGGT GTTTTGGGTG
TCTAAGGGCG GCGAGGAGGG AGAGAGACTG GTGCTCCGCC CCACGTCAGA GACGGCGATT
ATGCCGATGG TGAAGCTGTG GGTTCATGAC TACAAGGACC TCCCGCTTAG GCTTTACCAA
ATTGTCAGCG TCTTCCGGGC TGAGACTAAG ATGACGCACC CCATGATTAG GCTTAGGGAG
ATTTCCATGT TTAAAGAGGC TCACACCGTG CACGTTGATA GGGAGGATGC AGAGCGGCAG
GTTCGTGAGG CTGTGGAGAT TTACAAGAAA ATTTTTGACG AGATGTGCCT GGCGTATATG
ATAAACAAGA GGCCTGACTG GGATAAATTC GCCGGGGCTG AGTACACAAT AGCCTTCGAC
ACGGTGCTCC CCGATGGGAG GACCCTGCAG ATAGGCACGG TGCACTACCT GGGGACGAAC
TTCACCAGGG TTTTCGAGGT GACGTACCTC GCCGCGGATG GTACGAGGAG GCTTGCCCAC
ACCACCTCCT ACGGGATTTC GGAAAGGAGC ATAGCCGCCA TGCTCATCAC GCACGGCGAT
GACGCGGGGA CAGTCCTACC GCCGAGGTTG GCGCCTATTC AAGTAGTTAT TGTCCCCATA
TTCTACGGCG AGGAGGAGGC TGCATCTGTG ATATCTTACG CCAGGGAAGT GGAAAAGGCT
CTGCGAGAGG CCGGCATGCG CGTACACATC GATGATAGGC CTGATAAGAC GCCTGGGTGG
AAGTTCTACT TCTGGGAGCT GAAGGGGGTG CCTCTGCGCG TCGAAGTTGG GAAGAGGGAT
TTGGAGAAGA GGCAGGTTGT GATTACGAGG AGGGATACCT TGGAGAAATA CGCCGTTGGG
CTGGGGGAGT TGGTGGACGC TGTGAGGGGG CTTATGAGAA CCGTGGAGGA GAATCTGCGG
AGGAGGGCGT GGGAGGAGTT GAGGAGTCGC ATCGTCCGGG CCGAGACGGT GGAGGCCGCC
AAGGCCGCCA TCCGTGAGGG GAAGGTGGTA GAGGTGCCGT GGAGTGGGGA TAACGACTGC
GGTATTAAGT TAAAAGACCT TGTCGGTGCC GATGCCTTGG GCGTCCCCCT AGACTCGGAC
GCGTCTGTGG GGGGCTTCGA CTTAAGGGAC TTGGCTTGCG GCGAAAAGCG GGCTGAGTTC
TGGCTGAGGC TTTCTGAGAG ATACTAA
|
|---|
| Protein sequence | MELIREARPH GREKLRANLI EWFHWLLREA ELYDVRYPVK GAYVWRPYGM RLRRHVEELI
RRSHDETGHQ EVLFPVFIPY EFFGKESQHI RGFEKEVFWV SKGGEEGERL VLRPTSETAI
MPMVKLWVHD YKDLPLRLYQ IVSVFRAETK MTHPMIRLRE ISMFKEAHTV HVDREDAERQ
VREAVEIYKK IFDEMCLAYM INKRPDWDKF AGAEYTIAFD TVLPDGRTLQ IGTVHYLGTN
FTRVFEVTYL AADGTRRLAH TTSYGISERS IAAMLITHGD DAGTVLPPRL APIQVVIVPI
FYGEEEAASV ISYAREVEKA LREAGMRVHI DDRPDKTPGW KFYFWELKGV PLRVEVGKRD
LEKRQVVITR RDTLEKYAVG LGELVDAVRG LMRTVEENLR RRAWEELRSR IVRAETVEAA
KAAIREGKVV EVPWSGDNDC GIKLKDLVGA DALGVPLDSD ASVGGFDLRD LACGEKRAEF
WLRLSERY
|
|---|
| |