Gene Pars_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0669 
Symbol 
ID5055819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp595165 
End bp596211 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content58% 
IMG OID640468229 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001152912 
Protein GI145590910 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCGG TTATACTTGG GGGCGGCATA GCGGCGGTCT TCACGGCGTA TTTCCTAAGA 
GAGAGGGGTT TCGACGTGGT TGGGGTCGGG GGAGAGGTTT CCTACCCCCT CGTCTCTCTT
GTGTTGACCA CGTCGATGCC TCACAGAGAG GATATAGAAC TGGCGTTGAG GAGCCTAGAA
ATTTGGAAAA AATTTGTCAA TCCAAAAGAG GTAGTTTCTG TCGATATTCT TCCGAGGTGG
GTTGACCTCT CACGTCTGCG TGGCGTTTCC TACGAGGTTG TGGATAAGGT AGACGGCGTG
CGGCTTGCCG CAGACGAGGT TGCTGTGTTG ACCAGGGACT ACCTAATCCC AGTGAGGGAT
GTGGTATCTA GGCTCAGGCG CGAGTTGGGG TTTTCCAACT CGTATGGGTT GTTGAAGGTG
GAGGGGAGGA GGGCCGTGGT GGTGGCGGAT GGGGGGAGGA TAGAGGGCGA CGTCGTGGTG
CTGGCTGCCG GGTATAAAAA CAACATACTC GCAGGCGAGG CCGGCGTGAG GTTGCCGCTG
GCCCCCTATG AGTGCTACGC AGTATTGCTA GTGACGGGGA GGAAGGCGCG GCGGTACAGC
ATAGGGGACT ACGTCCTCGG GTGGTACGGG CGGCCAGGCC CGCCTCTCTT GTACATTGCT
GGCGACGGGT GCGGGAGGGT GGGCGAGGGG CCGCCGCCTA ACTACCAGAG GAGGCTGGCG
AACTTGGTAT CGCAGAGGCT CGGCGCCGCG ATTCCGTTGT ACCTGAAAGT CGGCTACTGC
GAAGTTGGCC CACACGGGGG CCCGCTTTAT GGGAAGCACC CGGAACTAGA AAACCTGTAC
GTCATAGGCG GCTTTAACGG ATATGGTAGC ATGGTTGGCC CGGCTCTGGC AGAGCGACTT
GCAGAACTCA TGGCCGGTAG GGCTCGGGAA GATGGTTTTA GGCTTGAAAA ATATCTGGGG
GCTCGTGTTT TTGATCCGTG CGATGTAGCC GAGCGGCATG ACTGGGGCGC TGTGTTGCTA
CGTAACGCTT ATAAACACAA TGAATAG
 
Protein sequence
MRAVILGGGI AAVFTAYFLR ERGFDVVGVG GEVSYPLVSL VLTTSMPHRE DIELALRSLE 
IWKKFVNPKE VVSVDILPRW VDLSRLRGVS YEVVDKVDGV RLAADEVAVL TRDYLIPVRD
VVSRLRRELG FSNSYGLLKV EGRRAVVVAD GGRIEGDVVV LAAGYKNNIL AGEAGVRLPL
APYECYAVLL VTGRKARRYS IGDYVLGWYG RPGPPLLYIA GDGCGRVGEG PPPNYQRRLA
NLVSQRLGAA IPLYLKVGYC EVGPHGGPLY GKHPELENLY VIGGFNGYGS MVGPALAERL
AELMAGRARE DGFRLEKYLG ARVFDPCDVA ERHDWGAVLL RNAYKHNE