Gene Pars_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0656 
Symbol 
ID5056036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp583961 
End bp584980 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content56% 
IMG OID640468216 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_001152899 
Protein GI145590897 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.737559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCGG TGGTTGTGCC AACCTACAAT GAGGCTGAGA ATATCGAGGA GCTGGTGAAG 
AGGTTGGCCA GTGTGTTTCG TAGCGACTAC GAGGTTATTA TAGTAGATGA CAACAGCCCT
GATGGAACTG CCGATGCGGC AAAAAAGCTC TCAGCCACAT ACCCAGTCCG TGTAGTTGTC
AGGCAAACAC GTCTAGGCCT CGCCAGCGCA GTTGTGGAGG GCGCCTCAGT AGCTAGGGGA
GACGTGGTGG TGGTCATGGA CGCAGATCTT CAACACCCCC CGGAGCTGGC GCCTGCCTTG
GCCAGAGAGG CGGCTAGGGG CTGCCTTGCT GTTGCATCTA GATATGTGAG AGGAGGCCGC
GTAGAAGGGT GGCCAATCAC GAGAAGGGTG GTATCTCGGG GGGCCGTGCT CCTCGCAAGA
CTTCTTTTAC CAGAGGCTAG GACGGTTAAA GACCCCGTCT CCGGCTTTTT TGCATATAGA
AGAGACTGCT TATCAAGGGT CAAGCCAACC GGCTTGTACA AAATACTCCT AGACGTGCTA
GTGCAGTGCA AGCCGGAGTG CGTCGTCGAG ATTCCCTTCG TCTTTGGCAA AAGGACTAGA
GGGAGGTCTA AGTTGGGGAG ACGTCACATA TTCGACTACC TCCGCCAGCT ACTCGCCCTC
TCTAAATGGC GGCCTGTGAA ATTCGCCGCG GTGGGGGCAA CGGGCATCGG CGTTGCGCTG
GCCGTCCTGC ACTTCCTCAG CTGGCTCCCC GCCCTCGTCT CAACCGCAAT AGCTATTGAG
GTGAGTCTGA CTTCGAATTA TATCTTGAAC AGGGCGTGGA CCTTTGCCGA GAGGCACACA
CCCCTACTCG GCGGGTGGGC CAAATACCAC CTCGCCACCG CGATAGGGAA CTCCACAAAC
TACTTGGTTA CAAACGCCTT GGCTTTTCTG GGCGTGTGGA TTTACGTGGC CTACCTTATA
GGCGTTGCGG CTGGGTACGC TGCCAACTAC GTATTTTCAG AACTGGAGGT GTTTAAATAG
 
Protein sequence
MISVVVPTYN EAENIEELVK RLASVFRSDY EVIIVDDNSP DGTADAAKKL SATYPVRVVV 
RQTRLGLASA VVEGASVARG DVVVVMDADL QHPPELAPAL AREAARGCLA VASRYVRGGR
VEGWPITRRV VSRGAVLLAR LLLPEARTVK DPVSGFFAYR RDCLSRVKPT GLYKILLDVL
VQCKPECVVE IPFVFGKRTR GRSKLGRRHI FDYLRQLLAL SKWRPVKFAA VGATGIGVAL
AVLHFLSWLP ALVSTAIAIE VSLTSNYILN RAWTFAERHT PLLGGWAKYH LATAIGNSTN
YLVTNALAFL GVWIYVAYLI GVAAGYAANY VFSELEVFK