Gene Pars_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0620 
Symbol 
ID5056195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp551458 
End bp554082 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content59% 
IMG OID640468178 
Productaconitate hydratase 
Protein accessionYP_001152863 
Protein GI145590861 
COG category[C] Energy production and conversion 
COG ID[COG1048] Aconitase A 
TIGRFAM ID[TIGR01341] aconitate hydratase 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.343199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.507089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AGTTTGAAGT GAGGGGCGTT GCCTATAGGT ACTACCCCCT GAAATCTCTG 
GAAAGGGAGG GCTACGACGT GGGGCGACTT CCCTACTCCA TTAGAGTGCT TTTAGAAAAC
GTCCTGCGCA ACATGGACGG TAGGGACATC ACCAAGGAGC ACCTGGAGAG GCTCGCCCGG
TGGAACCCCA AGGCGCCAGA GGGGGAGGTG GCCATTAAGA TATCTAGAGT CGTGATGCAG
GACTACACCG GCGTCCCCGC CATCGTAGAC CTTGCCACTA TGCGGGAAAT CGCGAAGAAG
ATGGGGAGAG ACCCCACAGT AGTTAACCCA CAAGTCCCCG TCGACCTCAT CATCGATCAC
TCTGTGCAGG TGGACTTCTG GGGGTCAAGG GAGGCGCTTA GGCTAAACCT TGACCTCGAG
ATTAAGAGGA ATAGGGAGAG GTATAGGTTT TTGAAGTGGG CACAGCAAGC CTTTAAGAAC
CTCCGCGTCT TCCCGCCGGG GACGGGCATT ATCCACCAGG TGAACCTCGA GTACCTGGCC
AAGGTTGTGA TGACCGACGG CGACCTTGCC TTCTTTGAGA CTCTCGTGGG CATGGACAGC
CACACCACGA TGATAAACGG GCTGGGAGTA GTGGGCTGGG GAGTAGGCGG CGTGGAGGCG
GAGGCCGCCA TGCTGGGCGA GCCCATAACT ATCAAGGTGC CGAGAGTGGT GGGGGTCCAC
CTATACGGCG AGCTGAGGCC CGGAGTCACC GCAACAGACG TGGTGCTGGC AATAACCGAG
TTCCTCAGGA AGGTCAACGT GGTTGACGCC TTTGTCGAGT TCTTCGGCGA GGGGGTGAAG
AAGCTGTCCG TCCCAGACCG CGCCACGATT GCCAACATGG CGCCGGAGTA CGGCTCCACC
ACTGGCCTCT TCCCCGTAGA CGAGAACACC CTTTCCTATC TAAGAGCCAC GGGTCGGCCG
GAGGCCCACA TAGCGCTGGT GAGGAAGTAC TACGAGCTCC AGGGAGTCTT CGGCGGCGTC
GAGGGGGCGG AGTACAGCCA AGTGGTGGAC TTCGACCTCT CAGCCGTGGA GAGGAACGTG
GCTGGCCCCA CGCTACCGTG GCAGAGAACT AGCCTAGCGG ATGTGCCGAA GAGCTTCGCG
GTGTTTTTAC AAGAGCGTAA GAAGAGGACT GCCAGGAAGG CGGTGGAGAT TGAGATTGAC
GGCAGGAGGG CGGAGTTCGG CGATGGAGAT GTGGTGATCG CCGCCATAAC TAGCTGCACC
AACACCAGCA ACCCCTACCT CCTCGTGGCG GCGGGTCTGG TGGCCAAGAG GGCGGTTGAA
CTTGGCTTGA GACCGCCGCC TTTCGTAAAG ACGAGCTTCG CCCCGGGGTC GAGGGCAGTC
GCCGACTTGC TGGAGAGAAG CGGGTTGCAG AAGTACTTGG ACCAGCTTGG CTTTAGTGTA
GTGGCCTTTG GCTGTACCAC ATGTATCGGC AACTCGGGAC CCCTCCCTGA GCCCGTCTCT
AGGGCCATTA AGCAACACGA CATATTAGCA ACGGCCGTTT TGTCGGGCAA TAGGAACTTC
GAGGCAAGGG TCCACCCAGA TGTCCGCGCT GCCTACCTCG CCTCGCCGCC ACTTGTAGTG
GCCTACGCTC TCGCCGGCAA CGTGTGGAAA AACCTAGAGA AAGACCCCCT AGGCCACGCA
AGCGATGGGA GGCCGGTCTA CCTAAAAGAT CTGTGGCCAA GCCCCGAGGA GGTGAACAGA
GTGGTGGAGG AGTGGCTAGA TCCGAAAATA TACGTCGAGA AGTACGGCAA GGTCGGCGAG
CTGGTCCCCG AGTGGCAGGC ACTTGAGGCG CCAGGCGGCA TACTTTACGA CTGGCGGCCG
GACGACACCT ACATACAGCC CTCGCCGCTC TTCGAAGGCG AGGTAAAAGT GAGCGACATC
ACCGGGGCGA GGCCTCTGCT GATCCTAGGC GACAGCATCA CCACAGACCA CATCTCCCCA
GCCGGCGGAA TAACCCAGGA CAACCCCGCC GGGCAGTACC TAATGTCCCT GGGAGTGAAG
CCCGCAGACT TCAACACCTT CGGCGCGAGG AGGGGCAACT GGCAGGTGAT GGTTAGGGGC
ACCTTCTCCA GCAAGGGGTA CAGGAACAAG ATAGGAAACC TAGAGGGTGG GCTCACCGTC
AAGTTCCCCG AGGGCAAAGT CTTGACTGTA TACGAGGCGG CAGAAGCCTA CAAGAAAGAG
GGCACGCCGG TTATTGTAGT CGCTGGCAAG AACTACGGCG CTGGGTCGAG CCGCGATTGG
GCCGCCAAGG GGCCAAAGCT CTTGGGCGTA AGGGCGGTAA TCGCGGAGAG CTTCGAAAGG
ATACACAGGT CAAACCTCAC GATGGTGGGA ATTATACCAA TCCAGCTACC GCCAGGCGTA
ACAGTGGACA GCCTCGGCTT AGACGGCACT GAGACCTTCG ACATAATGGG GCTGTCGGAG
CTCGCACCTG GGAAGGAAGT CGTCATAAGG ATACACAGAA AAGACGGCCG CGTCGACGAG
GTTAAGGCAA GGCTAGCCGT CTACACGTGG GCAGAGGTGG AATACATCAA ACACGGCGGA
ATACTCCCCT ACGTCTTAAA GAAGCTGTTT CAGAAAACGT TTTAA
 
Protein sequence
MAEKFEVRGV AYRYYPLKSL EREGYDVGRL PYSIRVLLEN VLRNMDGRDI TKEHLERLAR 
WNPKAPEGEV AIKISRVVMQ DYTGVPAIVD LATMREIAKK MGRDPTVVNP QVPVDLIIDH
SVQVDFWGSR EALRLNLDLE IKRNRERYRF LKWAQQAFKN LRVFPPGTGI IHQVNLEYLA
KVVMTDGDLA FFETLVGMDS HTTMINGLGV VGWGVGGVEA EAAMLGEPIT IKVPRVVGVH
LYGELRPGVT ATDVVLAITE FLRKVNVVDA FVEFFGEGVK KLSVPDRATI ANMAPEYGST
TGLFPVDENT LSYLRATGRP EAHIALVRKY YELQGVFGGV EGAEYSQVVD FDLSAVERNV
AGPTLPWQRT SLADVPKSFA VFLQERKKRT ARKAVEIEID GRRAEFGDGD VVIAAITSCT
NTSNPYLLVA AGLVAKRAVE LGLRPPPFVK TSFAPGSRAV ADLLERSGLQ KYLDQLGFSV
VAFGCTTCIG NSGPLPEPVS RAIKQHDILA TAVLSGNRNF EARVHPDVRA AYLASPPLVV
AYALAGNVWK NLEKDPLGHA SDGRPVYLKD LWPSPEEVNR VVEEWLDPKI YVEKYGKVGE
LVPEWQALEA PGGILYDWRP DDTYIQPSPL FEGEVKVSDI TGARPLLILG DSITTDHISP
AGGITQDNPA GQYLMSLGVK PADFNTFGAR RGNWQVMVRG TFSSKGYRNK IGNLEGGLTV
KFPEGKVLTV YEAAEAYKKE GTPVIVVAGK NYGAGSSRDW AAKGPKLLGV RAVIAESFER
IHRSNLTMVG IIPIQLPPGV TVDSLGLDGT ETFDIMGLSE LAPGKEVVIR IHRKDGRVDE
VKARLAVYTW AEVEYIKHGG ILPYVLKKLF QKTF