Gene Pars_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0498 
Symbol 
ID5054463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp444806 
End bp446227 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content55% 
IMG OID640468060 
Productnitrate reductase, beta subunit 
Protein accessionYP_001152745 
Protein GI145590743 
COG category[C] Energy production and conversion 
COG ID[COG1140] Nitrate reductase beta subunit 
TIGRFAM ID[TIGR01660] nitrate reductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.43114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.329648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC GCGCCCAGAT CGCCATGGTG ATGAACCTCG ACAAGTGTAT TGGCTGCCAC 
ACTTGCTCTG TGACTTGTAA AAACGTGTGG ACGAACAGAG CCGGAGCTGA GTATATGTGG
TGGAACAACG TGGAGACGCG CCCAGGGCCT GGCTACCCGA GGCAGTGGGA GAACCAGAAC
AGGTACAACG GCGGCTGGGC GCTGGATGGT GGCAGGCTTA AGCTAAAGAT TGAGATCACG
AAGAACTACA AACCGCCCTC GATGGAGGAC TACTACCATC CCTGGACGTA CGACTACGAG
GTGTTGTTCT CGGAGAAGCA GTCAGACCAG CAGCCCGTGG CGCGTCCCAT CTCGTTGATA
GACGGCGAGT CCATGGACGT GACCTACGGC CCTAACTGGA ACGACGACCT TGCCGGCGCC
GACTTGATCT TGGAGGATCC CGGCTTGGAC GGTTTGCAGA AGGAGATCTA CCAGCAGTTC
AAGGACGTGT TTATGATGTA CTTACCGAGA ATCTGCAACC ACTGTCTCAA CCCGTCGTGT
CTTGCGGCGT GTCCGAGAAA GGCCATATAC AAGAGGGAGG AAGACGGCAT AGTGTTGGTG
GATCAGAATA GGTGCCGCGG CTATCGCTAC TGCGTTGCCG CTTGTCCCTA CAAGAAGGTG
TACTACAACT GGAAGACAGG AAAGTCGGAG AAGTGCGTCT TCTGCTACCC GAGAATAGAG
GCTGGCCAGC CCACTGTGTG CTCTCTCACG TGCGTGGGGA AGATTAGATA CCTCGGCGTG
TTGCTCTACG ACGCCGATAA AGTGCTTGAC GTTGCGGCGA CCCCCGAGGT GTCACAACTG
GTGAAGAGGT TCATCGACGA AGTGCTACTA GACCCCTACG ACCCCGCGGT TGTGAGCGTT
GCTAAGGAAA GTGGGATTCC AGACGACTGG ATTAAAGCTG CCCAGAGATC GCCTGTCTAC
AAAATGGTGA AGAAGTGGAA GGTGGCATTC CCGTTGCGTC CTGAATTTAG GACTCTGCCA
ATGGTGTTCT ACGTGCCGCC CCTCAGCCCG GTGGTGACTA CGTTTGAGAG GGCCTACGGG
GCGAAGATCA CAGACATTAT GCCCAAGGTG AATGAATTGA GGATACCTAT CAAGTACCTG
GCTAACATGT TCACAGGTGG CGACACCATG CTTATTGAAC AAGCGCTTAA GAAGTTGCTG
GCTGTTAGGA TATATGAGAG GGCTAAAAAC GTGGCTGAGC CCGGCCTGGC GGACAAGGCC
AAAGTAGCGC TGGCAAAGGC GGGGCTAACA GAGGCAGACG CCGAGGAGAT GTACCGCCTC
TTCGCCATAG CGCGGTACGA GGACAGGTTT GTAATTCCGA CAAATCCGAA GAGGTATGCC
GCCAATCCAT ACGTAGAAAG GGGCGTGGCG GGGTTGCCAT GA
 
Protein sequence
MNVRAQIAMV MNLDKCIGCH TCSVTCKNVW TNRAGAEYMW WNNVETRPGP GYPRQWENQN 
RYNGGWALDG GRLKLKIEIT KNYKPPSMED YYHPWTYDYE VLFSEKQSDQ QPVARPISLI
DGESMDVTYG PNWNDDLAGA DLILEDPGLD GLQKEIYQQF KDVFMMYLPR ICNHCLNPSC
LAACPRKAIY KREEDGIVLV DQNRCRGYRY CVAACPYKKV YYNWKTGKSE KCVFCYPRIE
AGQPTVCSLT CVGKIRYLGV LLYDADKVLD VAATPEVSQL VKRFIDEVLL DPYDPAVVSV
AKESGIPDDW IKAAQRSPVY KMVKKWKVAF PLRPEFRTLP MVFYVPPLSP VVTTFERAYG
AKITDIMPKV NELRIPIKYL ANMFTGGDTM LIEQALKKLL AVRIYERAKN VAEPGLADKA
KVALAKAGLT EADAEEMYRL FAIARYEDRF VIPTNPKRYA ANPYVERGVA GLP